Query= MSMg01no330_h08.b1 MSMg01no330_h08.b1 CHROMAT_FILE:
MSMg01no330_h08.b1 PHD_FILE: MSMg01no330_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:10 2005
(236 letters)
>mm_chr3_139722312_139722947
Length = 636
Score = 441 bits (228), Expect = e-128
Identities = 234/236 (99%)
Strand = Plus / Plus
Query: 1 ccaccaactgttggatgttaactaggagatttggcaggtgcagagattttcagtcacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaccaactgttggatgttaactaggagatttggcaggtgcagagattttcagtcacctt 260
Query: 61 caaaattgagatgtagacacctaagccaaacagcacatacactagaaaaatcaacatcct 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 caaaattgagatgtagacacctaagccaaacagcacatacactagcaaaatcaacatcct 320
Query: 121 aaccatctggcaatggagcaaacatgtcactctttccacctctgattggcagtgtttcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaccatctggcaatggagcaaacatgtcactctttccacctctgattggcagtgtttcta 380
Query: 181 gaaatggagaaatttatatactatttctgatcttcacacaaaacgatcttggtttg 236
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaatggagaaatttaaatactatttctgatcttcacacaaaacgatcttggtttg 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no330_h08.g1 MSMg01no330_h08.g1 CHROMAT_FILE:
MSMg01no330_h08.g1 PHD_FILE: MSMg01no330_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:10 2005
(291 letters)
>mm_chr3_139887068_139887758
Length = 691
Score = 514 bits (266), Expect = e-150
Identities = 284/292 (97%), Gaps = 6/292 (2%)
Strand = Plus / Minus
Query: 1 atgatcttactctataatataaaggaaacatgtttcattttatgtatccc---acaaaag 57
|||||||||||||||||||||||||||||||||||||||||||| || | | |||||
Sbjct: 489 atgatcttactctataatataaaggaaacatgtttcattttatg-at--cataagaaaag 433
Query: 58 tttggaaataagagaaaatggcccgaaacacagcgatctattagttcactgagatttgtc 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tttggaaataagagaaaatggcccgaaacacagcgatctattagttcactgagatttgtc 373
Query: 118 agctttatgaaatgtttaaaagtaagtgctattttaaattgcaagctagcatcaagggaa 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agctttatgaaatgtttaaaagtaagtgctattttaaattgcaagctagcatcaagggaa 313
Query: 178 agaagcctgttgtggaaatatgactttaaagggcataaaggttggccttatatttttgca 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agaagcctgttgtggaaatatgactttaaagggcataaaggttggccttatatttttgca 253
Query: 238 taaatagtgaatatgtaactattttaaatatcaaagtcaaatgaatttttta 289
|||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 252 taaatagtgaatatgtaactattttaaatatcaaagtcaaataaatttttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
