Query= MSMg01no331_j17.b1 MSMg01no331_j17.b1 CHROMAT_FILE:
MSMg01no331_j17.b1 PHD_FILE: MSMg01no331_j17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:32 2005
(373 letters)
>mm_chr3_99444290_99445062
Length = 773
Score = 648 bits (335), Expect = 0.0
Identities = 364/377 (96%), Gaps = 8/377 (2%)
Strand = Plus / Plus
Query: 5 gaattcacgttttattgcgagttaatagtaatacattgtatcttcctttgggaattgtat 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacgttttattgagagttaatagtaatacattgtatcttcctttgggaattgtat 264
Query: 65 aataatgaataatttaaaaccacaagaaacgatccccactcactagaagaaatgtcttac 124
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 265 aataatgaataatttaaaaccacaagaaatgatccccactcactagaagaaatgtcttac 324
Query: 125 atgctacttttctcgggggtagagagtagtacaacaaaatatccatcactcagaatttat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgctacttttctcgggggtagagagtagtacaacaaaatatccatcactcagaatttat 384
Query: 185 ggttatttgcttgggaaacagtctcacattcactcacctctgtcctcacttatcattgaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggttatttgcttgggaaacagtctcacattcactcacctctgtcctcacttatcattgaa 444
Query: 245 gagcgttaggatacaaatattgtgtggtgggactatcacctagaaacattttcattgctt 304
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 445 gagcgttaggaaacaaatattgtgtggtgggaatatcacctagaaacattttcattgctt 504
Query: 305 ctgaaagtatttttcagacatatttagttatatat--gtagatat-g-----tatagata 356
|||||||||||||||||||||||||| |||||||| |||||||| | ||||||||
Sbjct: 505 ctgaaagtatttttcagacatatttaattatatatatgtagatatagatagatatagata 564
Query: 357 tgtagatatatgtatag 373
|||||||||||||||||
Sbjct: 565 tgtagatatatgtatag 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_j17.g1 MSMg01no331_j17.g1 CHROMAT_FILE:
MSMg01no331_j17.g1 PHD_FILE: MSMg01no331_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:32 2005
(338 letters)
>mm_chr3_99604568_99605305
Length = 738
Score = 615 bits (318), Expect = e-180
Identities = 333/338 (98%)
Strand = Plus / Minus
Query: 1 tatgtctggacttgtaggaatgttcctgtattgagtattatgcaggaatagtttgattta 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 538 tatgtctggacttgtaggaatgttcctgtattgagtattatgcgggaatagtttgattta 479
Query: 61 tctggacttactccagttttcaaattaatttctcagctctgagtaactctagccatgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tctggacttactccagttttcaaattaatttctcagctctgagtaactctagccatgtgg 419
Query: 121 gtatgtgatggtcatagccacatgctacctaagcctggatttccagttctcatagatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gtatgtgatggtcatagccacatgctacctaagcctggatttccagttctcatagatttt 359
Query: 181 ccactgacagctccaagtggctttttcacttcctccttgcctacctcctcatctcatgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ccactgacagctccaagtggctttttcacttcctccttgcctacctcctcatctcatgtg 299
Query: 241 gcacggtctcctgggctctcctgtgtaggtattagggctatagtgcttcagtttgcctga 300
||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 298 gcatggactcctggactctcctgtgtaggtattagggctatagtgcttcagtttgcccga 239
Query: 301 gagccctgtggcttttgtatcatttgcttctttgaatc 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gagccctgtggcttttgtatcatttgcttctttgaatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
