Query= MSMg01no333_h09.b1 MSMg01no333_h09.b1 CHROMAT_FILE:
MSMg01no333_h09.b1 PHD_FILE: MSMg01no333_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:39 2005
(132 letters)
>mm_chr3_51689207_51689743
Length = 537
Score = 232 bits (120), Expect = 6e-66
Identities = 131/137 (95%), Gaps = 5/137 (3%)
Strand = Plus / Plus
Query: 1 actgcccgaagccacagtttcctcccctgcaccctggggtaaaatcccccaagggtccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgcccgaagccacagtttcctcccctgcaccctggggtaaaatcccccaagggtccct 260
Query: 61 aagacaatctcccc-tccccaccactgctgaaggctctcaaaaaa----cattctggnag 115
|||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 261 aagacaatctccccgtccccaccactgctgaaggctctcaaaaaaaaaacattctgggag 320
Query: 116 caaggaacaagagattc 132
|||||||||||||||||
Sbjct: 321 caaggaacaagagattc 337
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 132
Length of database: 537
Length adjustment: 8
Effective length of query: 124
Effective length of database: 529
Effective search space: 65596
Effective search space used: 65596
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no333_h09.g1 MSMg01no333_h09.g1 CHROMAT_FILE:
MSMg01no333_h09.g1 PHD_FILE: MSMg01no333_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:39 2005
(342 letters)
>mm_chr3_51854768_51855509
Length = 742
Score = 632 bits (327), Expect = 0.0
Identities = 335/339 (98%), Gaps = 3/339 (0%)
Strand = Plus / Minus
Query: 1 tacatcttcatctgaaggctactaggacaagactggctcccatgtgcctaggaggaggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tacatcttcatctgaaggctactaggacaagactggctcccatgtgcctaggaggaggtt 646
Query: 61 ctcattgcccacagtgacacccttccttcaacaaagccacacctacatcaacaaggccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 645 ctcattgcccacagtgacacccttccttcaacaaagccacacctacatcaacaag---gc 589
Query: 121 acctcctaatattgctactccctgggtcaaccatattccaaccaccacaccttgtttcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 acctcctaatattgctactccctgggtcaaccatattccaaccaccacaccttgtttcag 529
Query: 181 gctacattgagattttgcaaatatggtgtttggaaaattagtcccatgtccgtacttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 528 gctacattgagattttgcaaatatggtgtttggaaaattagtcccatgtccatacttcaa 469
Query: 241 gtctacttggttttagtggcaggtttgcagaagccttgctagttcctggggatggcatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gtctacttggttttagtggcaggtttgcagaagccttgctagttcctggggatggcatat 409
Query: 301 gaaggatgaagagaagggagagaccttagttcccttttc 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gaaggatgaagagaagggagagaccttagttcccttttc 370
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
