Query= MSMg01no334_i17.b1 MSMg01no334_i17.b1 CHROMAT_FILE:
MSMg01no334_i17.b1 PHD_FILE: MSMg01no334_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:00 2005
(187 letters)
>mm_chr3_19506910_19507497
Length = 588
Score = 302 bits (156), Expect = 1e-86
Identities = 180/192 (93%), Gaps = 9/192 (4%)
Strand = Plus / Minus
Query: 1 cacgtcctc-agttcctgtctcttcagagtatacctgtgtttccctccaagtctctgagc 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cacgtcctcaagttcctgtctcttcagagtatacctgtgtttccctccaagtctctgagc 329
Query: 60 ttctctcttgactcctttccctctctcatagctgttcctggtacttggtgcttcgcagg- 118
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 328 ttctctcttgtctcctttccctctctcatagctgttcctggtacttggtgcttctcaggc 269
Query: 119 ---ttttttgtcaaggcactctaccaccctctgatcatatttcattttgatgggttaagc 175
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 268 agatt----gtcaaggcactctaccaccctctgatcatatttcattttgatgggttgagc 213
Query: 176 ccttccttgaat 187
||||||||||||
Sbjct: 212 ccttccttgaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 588
Length adjustment: 8
Effective length of query: 179
Effective length of database: 580
Effective search space: 103820
Effective search space used: 103820
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no334_i17.g1 MSMg01no334_i17.g1 CHROMAT_FILE:
MSMg01no334_i17.g1 PHD_FILE: MSMg01no334_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:00 2005
(273 letters)
>mm_chr3_19329447_19330119
Length = 673
Score = 499 bits (258), Expect = e-146
Identities = 270/274 (98%), Gaps = 2/274 (0%)
Strand = Plus / Plus
Query: 1 gatgtaaggcagagacaagagaactacctgtttctatgtcaactacagtgacttctagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatgtaaggcagagacaagagaactacctgtttctatgtcaactacagtgacttctagac 260
Query: 61 aagagagtgctctatt-aaaattgggttgtgaggtcagtatgcagctccagacaccaggt 119
|||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 261 aagagagtgctctattgaaaat-gggttgtgaggtcagtatgcagctccagacatcaggt 319
Query: 120 gtgtggtgcaagagactcaaagatggtacctgcttttccttaagtggttggagttttctc 179
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 320 gtgtggtgcaagagactcaaagatggtacttgcttttccttaagtggttggagttttctc 379
Query: 180 ttagagctctgggaatacttcctggtcctggcaaactcttactcatagcctctccccgac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttagagctctgggaatacttcctggtcctggcaaactcttactcatagcctctccccgac 439
Query: 240 cacaagtcatccaggaggcagctcctgttgcaga 273
||||||||||||||||||||||||||||||||||
Sbjct: 440 cacaagtcatccaggaggcagctcctgttgcaga 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space: 175296
Effective search space used: 175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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