XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTAA
ACCTGATAAACAACTTCAGCAAATCGGATGGATATAAAATTAACTCAAAC
AAATCAATGGTCTTTCTATACACAAATGATAAACAGGATGAGAAAGAAAT
TAGGGAAACAACACCCTTCAAAATAATCACAAATAATATGAAATACCTTT
GTGTTTCTAACTAAGGAACTGAAAAATCTGTCCCATCCAGCAGGACCCAG
TTATTCGTGGGTGGGGGGGGACCGCAAACCTGAAGAGAAATGAGCGAGAA
AGAGAAGAAAGATCAAGAAAAGAGTTGTCAAGGTCTCAGTTTATTAAGCT
GAAACGCCAGGTTATAAGCACACAGCAAGGGGAAATAGGGAGGGTCTGAG
GGGGAATTAACAAGGAAGAAAGAAGTGGGCATCTGGGGACATGAAGGCCG
AATTCAGACTGCAGGCAGGAAGCACTCTGAGTCTTATCTCCGGAATGAAG
ATTCCTCCTTAACAGTCCGGGATGTCAGGCTGGGCTCAGCCCATAACTCA
TGTCCTTAGTAGTCTTGGGAGTCAGGAAGAGATAAGGAAGAGAGGACTAT
AATTCAAACTTTTAGGGTCTTTGGTGTCAGCAAGAGATAGGGAGGAGGAG
GTGACCAGCTCCTTAACACAAGGCCATTTGGCTTATTAGGGTGAGAAGCT
GTGAAAGGCTTACTTTCTCACCGTA

CTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTGGTGAATTTAAAAGGGCCGAGAAATAAAAC
AAAGTCTGAGATGGATAGAATTAAATATGCTATTGTAATGAAATAGCTAT
TGTGGGATTTACATGCCAGCATCAGTGAAACACACATGTCAGCTCCTGCG
TTCATCTACATGATTCACTGTCCTATTAAGTTCAATAGCATAGAACTGCA
TGTAAAAGAAATTATTAAGAATTTTAAATTATAGCTGCCGAGCTTTTAAA
CAAACACGATGTCCTTTTGGAAACAGGGCTTTTGACAAGTCCTTGGCTGC
ACTTTCACACATGATCTCTAATGTACCACCACTAAAAAATGTTGTTACAC
TATTCTAAACCATGCTATTGAAAACCAATATAAAATGTTAGAGATTACAT
ACACAAAAGGAGTCATATATTTGGAGCAGATCAAGGAGGCATATAAGAGA
TGGTTCAATAGAGGAAAAGGAAGATAGAAATCATATAATTATATTATAAA
TTCAAAAATAAAAGAAGTAATTAAAATGTGCCACTTTACTGAGGAAGAGT
ATTACATTTTTTAAGTTAGTCCTCTAGCTTACTAGGCTCATATGTCTTAA
TTATAATTTTTCATGAAGTTTCAGAATGAGGAGTCATGTTGTTGAATGTG
ACATTATTTTTGTGTCCTGAATTACA

Query= MSMg01no335_f10.g1 MSMg01no335_f10.g1 CHROMAT_FILE:
MSMg01no335_f10.g1 PHD_FILE: MSMg01no335_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:04 2005
         (657 letters)



>mm_chr3_59675870_59676926
          Length = 1057

 Score = 1243 bits (643), Expect = 0.0
 Identities = 652/655 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tggtgaatttaaaagggccgagaaataaaacaaagtctgagatggatagaattaaatatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggtgaatttaaaagggccgagaaataaaacaaagtctgagatggatagaattaaatatg 260

                                                                       
Query: 61  ctattgtaatgaaatagctattgtgggatttacatgccagcatcagtgaaacacacatgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctattgtaatgaaatagctattgtgggatttacatgccagcatcagtgaaacacacatgt 320

                                                                       
Query: 121 cagctcctgcgttcatctacatgattcactgtcctattaagttcaatagcatagaactgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 cagctcctgcgttcatctacatgattcactgtcctattaagttcaatggcatagaactgc 380

                                                                       
Query: 181 atgtaaaagaaattattaagaattttaaattatagctgccgagcttttaaacaaacacga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtaaaagaaattattaagaattttaaattatagctgccgagcttttaaacaaacacga 440

                                                                       
Query: 241 tgtccttttggaaacagggcttttgacaagtccttggctgcactttcacacatgatctct 300
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 tgtccttttggaaacagggcttttgacacgtccttggctgcactttcacacatgatctct 500

                                                                       
Query: 301 aatgtaccaccactaaaaaatgttgttacactattctaaaccatgctattgaaaaccaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgtaccaccactaaaaaatgttgttacactattctaaaccatgctattgaaaaccaat 560

                                                                       
Query: 361 ataaaatgttagagattacatacacaaaaggagtcatatatttggagcagatcaaggagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataaaatgttagagattacatacacaaaaggagtcatatatttggagcagatcaaggagg 620

                                                                       
Query: 421 catataagagatggttcaatagaggaaaaggaagatagaaatcatataattatattataa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catataagagatggttcaatagaggaaaaggaagatagaaatcatataattatattataa 680

                                                                       
Query: 481 attcaaaaataaaagaagtaattaaaatgtgccactttactgaggaagagtattacattt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attcaaaaataaaagaagtaattaaaatgtgccactttactgaggaagagtattacattt 740

                                                                       
Query: 541 tttaagttagtcctctagcttactaggctcatatgtcttaattataatttttcatgaagt 600
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttaagttaatcctctagcttactaggctcatatgtcttaattataatttttcatgaagt 800

                                                                  
Query: 601 ttcagaatgaggagtcatgttgttgaatgtgacattatttttgtgtcctgaatta 655
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttcagaatgaggagtcatgttgttgaatgtgacattatttttgtgtcctgaatta 855


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)