Query= MSMg01no339_a22.b1 MSMg01no339_a22.b1 CHROMAT_FILE:
MSMg01no339_a22.b1 PHD_FILE: MSMg01no339_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:49 2005
(544 letters)
>mm_chr3_47651316_47652258
Length = 943
Score = 861 bits (445), Expect = 0.0
Identities = 448/449 (99%), Gaps = 1/449 (0%)
Strand = Plus / Minus
Query: 5 gaattctcaaatttatctttaaaagcccctaaagaggaacattagggaggggtaagtgat 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gaattctcaaatttat-tttaaaagcccctaaagaggaacattagggaggggtaagtgat 390
Query: 65 ctataccttgattaatggtctctgtctctggcaggtctgggtgatgctatgatttaaact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ctataccttgattaatggtctctgtctctggcaggtctgggtgatgctatgatttaaact 330
Query: 125 aataatttttgctttatgcctaggaggtttagctcttgacctcatagctgcaagcttggc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aataatttttgctttatgcctaggaggtttagctcttgacctcatagctgcaagcttggc 270
Query: 185 tgactttcacaagtagggaatggttacttcttgacataagcctgtggttgttctagtgac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgactttcacaagtagggaatggttacttcttgacataagcctgtggttgttctagtgac 210
Query: 245 tagcatacccagttctgggaaatagaaactcagtgctggtctcctgaactgatagtttgc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tagcatacccagttctgggaaatagaaactcagtgctggtctcctgaactgatagtttgc 150
Query: 305 agcctagatcgggccaatttattccttgcatattgaataggtatggagagattggaaaac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 agcctagatcgggccaatttattccttgcatattgaataggtatggagagattggaaaac 90
Query: 365 ttgacttcttgatttaataaaattggtttgagagtctcccaatttcagttgaggttgggt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ttgacttcttgatttaataaaattggtttgagagtctcccaatttcagttgaggttgggt 30
Query: 425 atttgctttctggaaactaaatcaattta 453
|||||||||||||||||||||||||||||
Sbjct: 29 atttgctttctggaaactaaatcaattta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 943
Length adjustment: 10
Effective length of query: 534
Effective length of database: 933
Effective search space: 498222
Effective search space used: 498222
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_a22.g1 MSMg01no339_a22.g1 CHROMAT_FILE:
MSMg01no339_a22.g1 PHD_FILE: MSMg01no339_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:49 2005
(359 letters)
>mm_chr3_47503937_47504695
Length = 759
Score = 694 bits (359), Expect = 0.0
Identities = 359/359 (100%)
Strand = Plus / Plus
Query: 1 atttttgagtgtggtatgagagttttaagatgaaataaactctttcctccccaagttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttttgagtgtggtatgagagttttaagatgaaataaactctttcctccccaagttttc 260
Query: 61 ttttttatttttaagttatgatattttttaacagcaataaaaactttaagaaagataaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttttatttttaagttatgatattttttaacagcaataaaaactttaagaaagataaga 320
Query: 121 gacccattctgctagaagcaaaattcacatctaaatttgaagtttgtaggggctgtaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacccattctgctagaagcaaaattcacatctaaatttgaagtttgtaggggctgtaagt 380
Query: 181 ttgtgctgtggcagcagtcactggtcactaggcttatctaacttttcttttgaatgaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtgctgtggcagcagtcactggtcactaggcttatctaacttttcttttgaatgaggt 440
Query: 241 tctgcttaccctcccactgctgacactttctggccagagatctgttcactttgtttgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgcttaccctcccactgctgacactttctggccagagatctgttcactttgtttgttt 500
Query: 301 gtttgtttgtttgttttgttattttgtttcttttgttgttattgttgttcttttggtcc 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtttgtttgtttgttttgttattttgtttcttttgttgttattgttgttcttttggtcc 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
