Query= MSMg01no339_b22.b1 MSMg01no339_b22.b1 CHROMAT_FILE:
MSMg01no339_b22.b1 PHD_FILE: MSMg01no339_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:53 2005
(567 letters)
>mm_chr3_124802002_124802968
Length = 967
Score = 1083 bits (560), Expect = 0.0
Identities = 565/567 (99%)
Strand = Plus / Plus
Query: 1 aagcacttgggggttttaatcactgatcaatctctacagtcccatattctgattttaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagcacttgggggttttaatcactgatcaatctctacagtcccatattctgattttaagt 260
Query: 61 aatacaatatctacttatgttgaatttatttgtattttaaaagaccagaaaataaaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatacaatatctacttatgttgaatttatttgtattttaaaagaccagaaaataaaaata 320
Query: 121 acatacttctaatggctctacactatatacttatggaatctacaatatcatgtatccata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatacttctaatggctctacactatatacttatggaatctacaatatcatgtatccata 380
Query: 181 cttattgcaaataaaaccttcgataatatatttaaagacaagtattaagtactttgattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttattgcaaataaaaccttcgataatatatttaaagacaagtattaagtactttgattt 440
Query: 241 ctctcaacaatatgctactgcaattcttctactttgtgacaggagttatcgtatgctaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctcaacaatatgctactgcaattcttctactttgtgacaggagttatcgtatgctaaa 500
Query: 301 gtatttccattaaagtcttatactctcttcattgtacaagacagagaattctagacaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtatttccattaaagtcttatactctcttcattgtacaagacagagaattctagacaggc 560
Query: 361 actggcataaacatcaggagaaggaataaagagtgattaatgtaaccaaaacatcactgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actggcataaacatcaggagaaggaataaagagtgattaatgtaaccaaaacatcactgt 620
Query: 421 catttcatttgtgacctaatacaactaacattttcaatataatcaatgtagatatttgtt 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 catttcatttgtgacctaatacaactaacattttcaatgtaatcaatgtagatatttgtt 680
Query: 481 tacaccacagagaataaatatgtagtanagacatatggctctgtagtgatcaaatgtata 540
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 681 tacaccacagagaataaatatgtagtaaagacatatggctctgtagtgatcaaatgtata 740
Query: 541 ctagattcacttgttctcttttacata 567
|||||||||||||||||||||||||||
Sbjct: 741 ctagattcacttgttctcttttacata 767
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_b22.g1 MSMg01no339_b22.g1 CHROMAT_FILE:
MSMg01no339_b22.g1 PHD_FILE: MSMg01no339_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:54 2005
(342 letters)
>mm_chr3_124952086_124952824
Length = 739
Score = 615 bits (318), Expect = e-180
Identities = 335/342 (97%), Gaps = 3/342 (0%)
Strand = Plus / Minus
Query: 1 atacatgaaagagaactgtttttgttttggggtttttctttttggtttttgttttgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 atacatgaaagagaactgtttttgttttggggtttttctttttggtttttgttttgtttt 550
Query: 61 gttttgttttttaattgttgttgctcttgtgttttgaggcagttaaaaaaacaaacaaat 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 549 gttttgttttttaattgttgttgctcttgtgttttgaggctgttaaaaaaacaaacaaat 490
Query: 121 gagcagatcagggatcataaacaatgaagtgaaatttgagacatggagtatttacatagt 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 489 gagcagatcagggatcataaacaatgaagtgaaatttgagacatggaatatttacatagt 430
Query: 181 aatgggaagggaagtgagggagatgtgagacaggaaaggagtaataactaaaatgaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aatgggaagggaagtgagggagatgtgagacaggaaaggagtaataactaaaatgaagag 370
Query: 241 catataaaaaggatagatgtgcatatactattttgtaagccatggttattgttgtttttt 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 369 catataaaaaggatagatgtgcatatactattttgtaagccatgggtattgtt---tttt 313
Query: 301 gtttgaacagtttagagtttgagatatacatttcctttgtag 342
|||||||||||||||||| |||||||||||||||||||||||
Sbjct: 312 gtttgaacagtttagagtatgagatatacatttcctttgtag 271
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 739
Length adjustment: 9
Effective length of query: 333
Effective length of database: 730
Effective search space: 243090
Effective search space used: 243090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
