Query= MSMg01no339_o06.b1 MSMg01no339_o06.b1 CHROMAT_FILE:
MSMg01no339_o06.b1 PHD_FILE: MSMg01no339_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:49 2005
(526 letters)
>mm_chr3_105044653_105045578
Length = 926
Score = 729 bits (377), Expect = 0.0
Identities = 386/389 (99%), Gaps = 2/389 (0%)
Strand = Plus / Minus
Query: 5 gaattctttcttctcagtttcacttccttcaagcatctaagtccactacctggatatgga 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gaattctttcttctaagtttcacttccttcaagcatctaagtccactacctggatatgga 329
Query: 65 agaatctggaaagtctgctccctgtgccctctgttccatgttcctcctccttcccaccag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 agaatctggaaagtctgctccctgtgccctctgttccatgttcctcctccttcccaccag 269
Query: 125 aggagacttcttaagatcagacgtccaccatgatgtcatggttctaggattacagtaaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aggagacttcttaagatcagacgtccaccatgatgtcatggttctaggattacagtaaat 209
Query: 185 ttcatgg-ctggggagatggttccacgcaagcatgagaatctgaattttagatccctgaa 243
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttca-ggactggggagatggttccacgcaagcatgagaatctgaattttagatccctgaa 150
Query: 244 attaatgtaaagcccaggtttagtgctgtattcccacaacttcagcactatggacaccta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 attaatgtaaagcccaggtttagtgctgtattcccacaacttcagcactatggacaccta 90
Query: 304 gacaggaggagctcagcggatcacaagccaattggtgggctctacgttgagtgaaagact 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 gacaggaggagctcagcggatcacaagccaattggtgggctctacgttgagtgaaagact 30
Query: 364 gggtctcaaaagaataaggtaaaaacctg 392
|||||||||||||||||||||||||||||
Sbjct: 29 gggtctcaaaagaataaggtaaaaacctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_o06.g1 MSMg01no339_o06.g1 CHROMAT_FILE:
MSMg01no339_o06.g1 PHD_FILE: MSMg01no339_o06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:50 2005
(460 letters)
>mm_chr3_104890372_104891231
Length = 860
Score = 859 bits (444), Expect = 0.0
Identities = 456/460 (99%)
Strand = Plus / Plus
Query: 1 ctgcagcttttcagaatagcaccactggctggaaaccaagtgttcaaacacatgaacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgcagcttttcagaatagcaccactggctggaaaccaagtgttcaaacacatgaacata 260
Query: 61 cgggtgacgtttccctttcaacctgtaacactctgcccttggtgtccacaggctcattag 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggtgacgtttccctttcaacctgtaacactctgcccttggtgtccacaggctcattag 320
Query: 121 ctactgtctttgagcattagcatctaatcacagaggttaagttactctttgggacttgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctactgtctttgagcattagcatctaatcacagaggttaagttactctttgggacttgcc 380
Query: 181 cgaattctttctagtttagaggctttggaccaaatgaagctagagcacacagtctctgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgaattctttctagtttagaggctttggaccaaatgaagctagagcacacagtctctgca 440
Query: 241 ctacccaaagactagtgaggaggaagaaatgtcagagagaggatttgggggctagatttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctacccaaagactagtgaggaggaagaaatgtcagagagaggatttgggggctagatttg 500
Query: 301 tgtctgtgtgtccatgtgcatgtctgtgtgcatgcgtgtgcgtttctagctgaggactct 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtccgtgtgtccatgtgcatgtctgtgtgcatgcgtgtgcgtttctagctgaggactct 560
Query: 361 gagccaggtgctgagtgagacagacttaggtgtacacaggggcttgacagtccgaggagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 gagccaggtgctgagtgagacagacttaggtgtacacaggggcttgacagtcctaggagg 620
Query: 421 gaaggaagctgaggtagcaggttggctttcagtgagtgat 460
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 gaaggaagctgaggtagcaggttggctttcagtgggtgat 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
