Query= MSMg01no341_m04.b1 MSMg01no341_m04.b1 CHROMAT_FILE:
MSMg01no341_m04.b1 PHD_FILE: MSMg01no341_m04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:05 2005
(454 letters)
>mm_chr3_119722160_119723013
Length = 854
Score = 843 bits (436), Expect = 0.0
Identities = 447/452 (98%), Gaps = 5/452 (1%)
Strand = Plus / Plus
Query: 3 cggaattcaacattgtcca--taaagatttaatttcgagaaacactcagatttaaatgta 60
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cggaattcaacattg--caaataaagatttaatttcgagaaacactcagatttaaatgta 260
Query: 61 aatgacccactctcaccttgatgccaactttttaattagaatctttggaattgaatcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgacccactctcaccttgatgccaactttttaattagaatctttggaattgaatcagc 320
Query: 121 atagtcattcattcattcattcattcatccatttgttcaatatttattgagaacctagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagtcattcattcattcattcattcatccatttgttcaatatttattgagaacctagtg 380
Query: 181 agggccatgcattgtgttggggattaagataacaaatatgaataaataatgattcccaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agggccatgcattgtgttggggattaagataacaaatatgaataaataatgattcccaac 440
Query: 241 tttaaggatcccacagtccaatggtggggatagatgggaaacccaatcataacaaagact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttaaggatcccacagtccaatggtggggatagatgggaaacccaatcataacaaagact 500
Query: 301 ttgggagcacaaagcattcactctctgatttgttttttttgtttttttaaatatcagtct 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 ttgggagcacaaagcattcactctctgatttgttttttt-gtttttttaaatatcagtct 559
Query: 361 gattctgcataaatggctatttgtaaatgagggcacctacctcagttgatctgcaaaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gattctgcataaatggctatttgtaaatgagggcacctacctcagttgatctgcaaaaga 619
Query: 421 ggtctggaaaagaacaggagagtgataaccag 452
||||||||||||||||||||||||||||||||
Sbjct: 620 ggtctggaaaagaacaggagagtgataaccag 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_m04.g1 MSMg01no341_m04.g1 CHROMAT_FILE:
MSMg01no341_m04.g1 PHD_FILE: MSMg01no341_m04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:06 2005
(351 letters)
>mm_chr3_119878360_119879110
Length = 751
Score = 671 bits (347), Expect = 0.0
Identities = 350/351 (99%)
Strand = Plus / Minus
Query: 1 cagacatcaggagctacagaaaacactccacagtcctcagaaaggtttcctcacatagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 cagacatcaggagctacagaaaacactccacagtcctcagaaaggtttcctcacatagtc 469
Query: 61 actaaactctgtgtatggtatgtgtgttacaaacttcccacaattgcgcaaggattgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 actaaactctgtgtatggtatgtgtgttacaaacttcccacaattgcgcaaggattgttt 409
Query: 121 gaaaagattacaaaaatcaaggctcagcattcatagaaaacttggaggggtgcctgattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gaaaagattacaaaaatcaaggctcagcattcatagaaaacttggaggggtgcctgattc 349
Query: 181 atcctctgtactgtaaattcctccaagtcatggcattcatggagaatgattcacaatggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 atcctctgtactgtaaattcctccaagtcatggcattcatggagaatgattcacaatggc 289
Query: 241 ctcatttcaggaagtagttggaatactaaattgtttccacatttaaatttttaaaagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ctcatttcaggaagtagttggaatactaaattgtttccacatttaaatttttaaaagaaa 229
Query: 301 aagaaaaaggaggagaaggatacagaggagaaaggaaggaaggaaggaagg 351
|||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 228 aagaaaaaggaggagaaggagacagaggagaaaggaaggaaggaaggaagg 178
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space: 253764
Effective search space used: 253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
