XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGT
TTACAAAGTATCCCATTTCTTAACAGTGTTATTTGTTTTTCTGAAGTTTA
AACATCTTGAGTTCTTTATATATATTGAATATTAACCCTCTATCAGATGT
AGGGTTGGTAAAGTTCTTTTCCCAATCTGTTGGTTGCCATTTTGTCCTAT
TGACAGTGTCCTTTGCCTTACAGAAGCTTTGCAGTTTTATGAGGTCCCAT
TTGTTAATTCTTGATCTTACAGTATAAGTCATTGGTGTTCTGGTCAGGGA
TTTTTTTTCTCTGCCCACATGCTTAAAGCTCTTCCCTACTTTCTTTTCTA
TTAGTTTCAGTGTATCTGGTTTTATGTGGAGGTCCTTGATGCACTTTGAC
TTCAGCTTTGTACAAGGTGATAAGAATGGATTTATTTACATTCTTCTACA
TGCTAAACACCAGTTGAACCAGCACCATATGTTAAAAATGCTTTCTTTTT
TTCCAATTGATGGTTTTATATCCTTGGTCAATGACCAAGTGACCACAGGT
ATGTGGCTTTATTTCTGAATCTTCAATTCTATTCCATTGATTTATCTGGC
TTTCACGTGGCAAAACATGAAATTTGGGGCACAATTTCTTTTGAAGAACG
CTCCCTTAAATTCTTTTCTTCTAAAACGGAAATTTCTTGCCAAAAAATAT
TTTTCTTTTTTAATATAACCCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTTATTTCAGTGTTATCATGTTCTCTGGACCAAATAT
AAAGAACTATGAACAGTCAAGCACAAGAAGTCACATGTTCTGGGCTGTGC
ATTTCCAAAAGCAACCATGCCACACACAGTCTGGGATTTTTACTTTTTTA
CTTTTTTGGTTCCTGATTTATCTCTTTTCAAGTCTGTAAGCTGAAACAAA
AGGTTTCAATGAAATGTTAGAACCCACCAGTCAATGACTTCCTTCATAGA
ATAAATGCCAATGCTTCTCTGCTAGCCTAGACTTAGAGATTTAGCACAAG
TCAATAAATAAACAATGTATGGGGGAGCTAAGCAAAGGAGGATCCTTTTA
GAGAGACTGGCTTATAGTGCCTGAGGGCCTTGCATTGCTTCTTGGAGCAG
CAGGTGACATTCTCATTTCGTCATTTGTGTGTTTCCTGTATCACCTCCTA
TGCCCATCAAATAATGGTGCAAGGGAGTAATACTGGTGACCTCCCTTATG
TAGTCTCAGCACTGCAGGGCACAAAGAATGAGAAATGCTACTTCTCCTTC
AGGTTCCACAAAAACTGTCTGTTCTTGAAACCCTCCCGGTTTCTTTTCAT
TGCCTCTCCCTAATAGTCAAAGGCCCCAAGGAAACCCCTTCATTAAAATT
AATAAACTATTTCCCCACTCCCCACTTTCTTN

Query= MSMg01no342_b15.g1 MSMg01no342_b15.g1 CHROMAT_FILE:
MSMg01no342_b15.g1 PHD_FILE: MSMg01no342_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:32 2005
         (443 letters)



>mm_chr3_18369179_18370021
          Length = 843

 Score =  841 bits (435), Expect = 0.0
 Identities = 438/439 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   ttcagtgttatcatgttctctggaccaaatataaagaactatgaacagtcaagcacaaga 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ttcagtgttatcatgttctctggaccaaatataaagaactatgaacagtcaagcacaaga 584

                                                                       
Query: 65  agtcacatgttctgggctgtgcatttccaaaagcaaccatgccacacacagtctgggatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 agtcacatgttctgggctgtgcatttccaaaagcaaccatgccacacacagtctgggatt 524

                                                                       
Query: 125 tttacttttttacttttttggttcctgatttatctcttttcaagtctgtaagctgaaaca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tttacttttttacttttttggttcctgatttatctcttttcaagtctgtaagctgaaaca 464

                                                                       
Query: 185 aaaggtttcaatgaaatgttagaacccaccagtcaatgacttccttcatagaataaatgc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 aaaggtttcaatgaaatgttagaacccaccagtcaatgacttccttcatagaataaatgc 404

                                                                       
Query: 245 caatgcttctctgctagcctagacttagagatttagcacaagtcaataaataaacaatgt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 caatgcttctctgctagcctagacttagagatttagcacaagtcaataaataaacaatgt 344

                                                                       
Query: 305 atgggggagctaagcaaaggaggatccttttagagagactggcttatagtgcctgagggc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atgggggagctaagcaaaggaggatccttttagagagactggcttatagtgcctgagggc 284

                                                                       
Query: 365 cttgcattgcttcttggagcagcaggtgacattctcatttcgtcatttgtgtgtttcctg 424
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 283 cttgcattgcttcttggagcaggaggtgacattctcatttcgtcatttgtgtgtttcctg 224

                              
Query: 425 tatcacctcctatgcccat 443
           |||||||||||||||||||
Sbjct: 223 tatcacctcctatgcccat 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space:   360689
Effective search space used:   360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)