Query= MSMg01no342_g12.b1 MSMg01no342_g12.b1 CHROMAT_FILE:
MSMg01no342_g12.b1 PHD_FILE: MSMg01no342_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:55 2005
(487 letters)
>mm_chr3_95703383_95704268
Length = 886
Score = 911 bits (471), Expect = 0.0
Identities = 483/487 (99%), Gaps = 1/487 (0%)
Strand = Plus / Plus
Query: 1 cgccctctcccaagcctctcaggtcagggcttgaacgtttccttgcagttgaattcttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgccctctcccaagcctctcaggtcagggcttgaacgtttccttgcagttgaattcttac 260
Query: 61 tgtaggtttttagggctcacctttgtatcttatttcatgtagacgactcagaatgtgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtaggtttttagggctcacctttgtatcttatttcatgtagacgactcagaatgtgatc 320
Query: 121 ataagctggattctcagtctcgcccacctgcaaaggcaatgtgccgatagacacacacgt 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 ataagctggattctcagtctcgcccacctgcaaaggcaatgtgccaatagacacacacgt 380
Query: 181 ttggagtgagtgctggggtacacttccgagaggcctgaggattagaataaaggatcagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggagtgagtgctggggtacacttccgagaggcctgaggattagaataaaggatcagag 440
Query: 241 agagactcttataggggctgggggatgctgacctcaatgaggatgcctaggacagccagg 300
|||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agagac-ctgagaggggctgggggatgctgacctcaatgaggatgcctaggacagccagg 499
Query: 301 ccctgtggcttctgagctgcctcactcaagctgctgtaggactgggagtcatagtgaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ccctgtggcttctgagctgcctcactcaagctgctgtaggactgggagtcatagtgaacc 559
Query: 361 acgtggagctgcagggggacagaaggaaacaaagttacctgatgtttcttaatccctcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acgtggagctgcagggggacagaaggaaacaaagttacctgatgtttcttaatccctcta 619
Query: 421 aggctttgatttcagtcacccccgcaattacccaacctgagtgtctacccccaaagcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aggctttgatttcagtcacccccgcaattacccaacctgagtgtctacccccaaagcttt 679
Query: 481 gtcttag 487
|||||||
Sbjct: 680 gtcttag 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 886
Length adjustment: 10
Effective length of query: 477
Effective length of database: 876
Effective search space: 417852
Effective search space used: 417852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_g12.g1 MSMg01no342_g12.g1 CHROMAT_FILE:
MSMg01no342_g12.g1 PHD_FILE: MSMg01no342_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:55 2005
(447 letters)
>mm_chr3_95864996_95865842
Length = 847
Score = 619 bits (320), Expect = 0.0
Identities = 326/328 (99%)
Strand = Plus / Minus
Query: 1 ttatttaaatttagggtctagaaaatgaaacagtctatcagccgggtctcagacttttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttatttaaatttagggtctagaaaatgaaacagtctatcagccgggtctcagacttttga 269
Query: 61 taccttcccttccttgttttttcacagttggatcagggctgaaggggttaatcaacagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 taccttcccttccttgttttttcacagttggatcagggctgaaggggttaatcaacagtt 209
Query: 121 agtgtccattatgggataacttacatttccttagaatttaaatattgaagtcctaatgga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 208 agtgtccattatgggataacttacatttccttagaatttaaatattgaagtcctaaagga 149
Query: 181 gcatcctaatgaaatgtcaatgcttagaaggtagctgtatttagagttggggtctttaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gcatcctaatgaaatgtcaatgcttagaaggtagctgtatttagagttggggtctttaaa 89
Query: 241 gaagacaactaaatccaaatgcagtcatcagagagcctctaacccaatacatttggtttg 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 ggagacaactaaatccaaatgcagtcatcagagagcctctaacccaatacatttggtttg 29
Query: 301 tatgaggaaattagaatacagaggctca 328
||||||||||||||||||||||||||||
Sbjct: 28 tatgaggaaattagaatacagaggctca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
