Query= MSMg01no342_h23.b1 MSMg01no342_h23.b1 CHROMAT_FILE:
MSMg01no342_h23.b1 PHD_FILE: MSMg01no342_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:02 2005
(446 letters)
>mm_chr3_127159641_127160486
Length = 846
Score = 572 bits (296), Expect = e-167
Identities = 311/316 (98%), Gaps = 2/316 (0%)
Strand = Plus / Minus
Query: 132 ggtgctgtgcactccacagggtagagtttgaaagtttcccacttcagtcctatgcaggat 191
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 846 ggtgctgtgcactccacagggtagagtttgaaagtttcctacttcagtcctatgcaggat 787
Query: 192 ataaaattattgcctctatttcacatgaaggaaaacagaaccaggctggaaagacgataa 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ataaaattattgcctctatttcacatgaaggaaaacagaaccaggctggaaagacgataa 727
Query: 252 agcatttaagaagggtcttatagttaataaaggactagtggctttgacttgcacactctt 311
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 726 agcatttaagaagggtcttatagttaaaaaaggactagtggctttgacttgcacactctt 667
Query: 312 aactccaaagcctgtgctttaagggactaacctactttgtgaatggaaaagttgagcatt 371
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 aactccaaaacctgtgctttaagggactaacctactttgtgaatggaaaagttgagcatt 607
Query: 372 agagatgagaactggcttactcaggatcaccactgtttatcagagtgctggagtgaggcc 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 agagatgagaactggcttactcaggatcaccactgtttatcagagtgctggagtgaggcc 547
Query: 432 c-ggacctgcctggta 446
| || |||||||||||
Sbjct: 546 cagg-cctgcctggta 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_h23.g1 MSMg01no342_h23.g1 CHROMAT_FILE:
MSMg01no342_h23.g1 PHD_FILE: MSMg01no342_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:02 2005
(426 letters)
>mm_chr3_127110908_127111733
Length = 826
Score = 791 bits (409), Expect = 0.0
Identities = 421/425 (99%)
Strand = Plus / Plus
Query: 2 ttgctgggaaacagagtgagaactccatcatttttcctccgctgtctgtgttctgccagc 61
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 202 ttgctgggaaacagagtgagaactccatcatttttcctctgctgtctgtgttctgccagc 261
Query: 62 tgacggtacctagtgcaaaatttaaccattaaaggggggcaatctcctagcaaccccact 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgacggtacctagtgcaaaatttaaccattaaaggggggcaatctcctagcaaccccact 321
Query: 122 gttgggcaaaactaatcaagtgtccacactacggcttcaccctgcctctcctcttagcac 181
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 322 gttgggcaaaactaatcaagtgtccacactacggcttcaccctgcctctcctcttatcac 381
Query: 182 ctactcccccagaacagggaagggtggcaaccactacatggtcctttggcacaaacacaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctactcccccagaacagggaagggtggcaaccactacatggtcctttggcacaaacacaa 441
Query: 242 cctgaatcttaagaagcagtgatgttgactgagggagttcccaccctctctgcgcccctc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cctgaatcttaagaagcagtgatgttgactgagggagttcccaccctctctgcgcccctc 501
Query: 302 gcttgccacagagaaaacaagtccacacagggttaagagaatctaaaatcaattcacttt 361
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gcttgccacagagtaaacaagtccacacagggttaagagaatctaaaatcaattcacttt 561
Query: 362 aatcgggtctaaaagaaaaatctgccttgcaattacaaaagaaaaaggaaaaacccccga 421
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aatcgggtctaaaagaaaaacctgccttgcaattacaaaagaaaaaggaaaaacccccga 621
Query: 422 aactg 426
|||||
Sbjct: 622 aactg 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
