XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTAACT
ATTCAAAGGGAAGATATCCTACAACAATTCCTTACAGCAAAATTGCTCAT
AGTTACATGAATTTCAAAATTTTGCCCTAATTCAAGAAACTGGAAAATTT
TGAATGGAAAATATTAAGGTGATAGGACAGAATAAGAGAATTCATCAATG
AAATAAACATACTAGTACAGTTAGAGTCAGAAAGAACCCTTTGCTCACAT
ACAAGGTGCAAAAAAGTAAACCAGAGGCAGGTGGAAAAGTACTATGCTGG
CTGGTTTTTAATGTCAGTTTGGTACAGACCAGAGTCATTTGAAAAGAGGA
AAGCTCGACTTAGAAAATGCCTACACTAGTTTAGTTTTTTAACAAGTCTG
GGGTACATTTTCCTTTTTTTTTTTTTTTTTTGAGACAGGGTTTCTCTGTA
TAGTACTGGCTGTCCTGGAACTCACTCTGGAGACCAGGCTGGCCTCGAAC
TCATAAATCCTCCTGCCTCTGCCTCCCAAGTGCTGTGATTAAAGGCTTGT
GCCACTGCCCACTGCCTGGGACATTTCCTATGGGAAGGCCCAATACCCTT
ATGGTCCGTGTATCCCCCGAGATTTTTAATCTTAAGGCGCCCACCCCACA
GTTTCTATTTTTTTTTTTTTGACGATTCACCCCCTTATTTTTTCGCACAC
CTATCTTCTTGTTTCCTC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCATTAAAAGCCCATGTATTACCAAGGTTTCTACTAT
GGTGCAAAAATAAACAAAACAAAACAAAACAAAACAAAACATAAACCAAA
CCAAACAGACAACAAAACGAAAAACTGATTAACAGTAACTTGTTGAGGAA
AAGTTTAATTGGCTTACATATCCAGGATCACAGGCTCTTGAGGAAATCAA
GAGCATGAAGTCAAAGCAGAAACACAAAGGCAGAAACTAAAGCAGAGGAA
GAGGGCTGCTTATGAGCATATGCCTCATGGTTTCTTCCCTTGCTTTCTTC
AATGACCCTGGATACCCTGGCCAGATGTGGGACTGCCCCAATGTATTGAC
TCATTCCACATCAATAATTAAGCATTAATAATCAAGAAACGTGTCCTGCA
ATTTGACCTAAGTCAAACTAGGAGGCATTTTATCAGTTGAGATTTCTTTT
TCCAGGTAAGTCTAGTTTTTGACAAATTGATAAAGCTAACTAGGATAATG
ATAGGATCATAAAAAACAGGCAACTTAAAAATGAAATAATTAAATAACGA
TAGTAATAATTATAACCATAATATGAATATAATACCCCCCAACTGATATA
CCGAAGCGTCAATATAACTAAATATTGAAAAAAAGTCCTTACCATAACCT
TAATAAATCTCCCCTACTCAAAAAN

Query= MSMg01no342_j07.b1 MSMg01no342_j07.b1 CHROMAT_FILE:
MSMg01no342_j07.b1 PHD_FILE: MSMg01no342_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:08 2005
         (463 letters)



>mm_chr3_77410663_77411525
          Length = 863

 Score =  806 bits (417), Expect = 0.0
 Identities = 445/459 (96%), Gaps = 8/459 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctaactattcaaagggaagatatcctacaacaattccttacagcaaaattgctca 64
           |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gaattctaactagtgaaagggaagatatcctacaacaattccttacagcaaaattgctca 398

                                                                       
Query: 65  tagttacatgaatttcaaaattttgccctaattcaagaaactggaaaattttgaatggaa 124
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 397 tagttacatgaatttcaaaattttgccctaatacaagaaactggaaaattttgaatggaa 338

                                                                       
Query: 125 aatattaaggtgataggacagaataagagaattcatcaatgaaataaacatactagtaca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aatattaaggtgataggacagaataagagaattcatcaatgaaataaacatactagtaca 278

                                                                       
Query: 185 gttagagtcagaaagaaccctttgctcacatacaaggtgcaaaaaagtaaaccagaggca 244
           ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 277 gttagagtcagaaagaaccctttgctcacatacaatgtacaaaaaagtaaaccagaggca 218

                                                                       
Query: 245 ggtggaaaagtactatgctggctggtttttaatgtcagtttggtacagaccagagtcatt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ggtggaaaagtactatgctggctggtttttaatgtcagtttggtacagaccagagtcatt 158

                                                                       
Query: 305 tgaaaagaggaaagctcgacttagaaaatgcctacactagtttagttttttaacaagtct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tgaaaagaggaaagctcgacttagaaaatgcctacactagtttagttttttaacaagtct 98

                                                                       
Query: 365 ggggtacattttccttttttttttttttttttgagacagggtttctctgtatagtactgg 424
           ||||||||||||||        ||||||||||||||||||||||||||||||||||||||
Sbjct: 97  ggggtacattttcc--------ttttttttttgagacagggtttctctgtatagtactgg 46

                                                  
Query: 425 ctgtcctggaactcactctggagaccaggctggcctcga 463
           |||||||||||||||||||| ||||||||||||||||||
Sbjct: 45  ctgtcctggaactcactctgtagaccaggctggcctcga 7


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space:   386409
Effective search space used:   386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)