Query= MSMg01no343_h08.b1 MSMg01no343_h08.b1 CHROMAT_FILE:
MSMg01no343_h08.b1 PHD_FILE: MSMg01no343_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:18 2005
(404 letters)
>mm_chr3_55017430_55018233
Length = 804
Score = 654 bits (338), Expect = 0.0
Identities = 347/350 (99%)
Strand = Plus / Plus
Query: 7 gaattcaaggaaagagacaagtgtcagccccaaaaagcttttttttattttttaagaagc 66
|||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaaggaaagaggcaagtgggagccccaaaaagcttttttttattttttaagaagc 266
Query: 67 aaaaatattattggggggaaaactgtatacaaacagattgtcttggcatgacaaaggggt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaaaatattattggggggaaaactgtatacaaacagattgtcttggcatgacaaaggggt 326
Query: 127 gctttaaagggttaatgtcaaccccatgcctgggagaaattcctgcagaatctactgagc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gctttaaagggttaatgtcaaccccatgcctgggagaaattcctgcagaatctactgagc 386
Query: 187 tcaaaatccttgccagctatcttgagacttgtgggaaattgaacacggagaaaggaattc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tcaaaatccttgccagctatcttgagacttgtgggaaattgaacacggagaaaggaattc 446
Query: 247 ctttcttggccaccggttgcctgcaccctgtgaatcaagatggctggattacaatgtaaa 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctttcttggccaccggttgcctgcaccctgtgaatcaagatggctggattacaatgtaaa 506
Query: 307 tattattgctggccacaagacttcccagagcttttaaaaaacctacccta 356
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tattattgctggccacaagacttcccagagcttttaaaaaacctacccta 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_h08.g1 MSMg01no343_h08.g1 CHROMAT_FILE:
MSMg01no343_h08.g1 PHD_FILE: MSMg01no343_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:18 2005
(406 letters)
>mm_chr3_55183195_55184001
Length = 807
Score = 451 bits (233), Expect = e-131
Identities = 320/395 (81%), Gaps = 71/395 (17%)
Strand = Plus / Minus
Query: 1 tatccatccccaatttcctttcaccatgggggagaatcataagaacggagtttgcttctc 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 325 tatccatccccaatttcctttcaccatgggggagaatcataagaactgagtttgtttctc 266
Query: 61 tgcagctgtaaaatacagctcggaggaaacaggc-ttatttggcttgcaggttgtggctc 119
|||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 265 tgcagctgtaaagtacagctcggaggaaacaggctttatttggcttgcaggttgtggctc 206
Query: 120 atcatcaaggcaaggcaaggcaaggcaaggcaaggcaaggcaaggcaaggcaaggcaagg 179
|||||
Sbjct: 205 atcat------------------------------------------------------- 201
Query: 180 caaggcaaggcaaggcaaggcaaggcaaggcaaggcaaggcaaggcaaggcagaagcttg 239
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ---------------caaggcaaggcaaggcaaggcaaggcaaggcaaggcagaagcttg 156
Query: 240 gggcgggaactgaaaccgagactatggaagaagactgcttacatgcctgctcccgggctc 299
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 155 gggcgggaactgaaaccgagactatggaagaagactgcttacaagcctgctcccgggctc 96
Query: 300 acattagctacctttcttatatagatagcccaggcccacctaaggaaagcacttcccaca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 acattagctacctttcttatatagatagcccaggcccacctaaggaaagcacttcccaca 36
Query: 360 gtaggctggatcctataatcccattatcagtcaag 394
|||||||||||||||||||||||||||||||||||
Sbjct: 35 gtaggctggatcctataatcccattatcagtcaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 807
Length adjustment: 9
Effective length of query: 397
Effective length of database: 798
Effective search space: 316806
Effective search space used: 316806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
