Query= MSMg01no343_n16.b1 MSMg01no343_n16.b1 CHROMAT_FILE:
MSMg01no343_n16.b1 PHD_FILE: MSMg01no343_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:50 2005
(430 letters)
>mm_chr3_18063974_18064803
Length = 830
Score = 824 bits (426), Expect = 0.0
Identities = 426/426 (100%)
Strand = Plus / Minus
Query: 5 gaattcaatgtccttgtgttgatcccatgcaccctgtaatttcatctgttacaaaataag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gaattcaatgtccttgtgttgatcccatgcaccctgtaatttcatctgttacaaaataag 571
Query: 65 agaatggttcgtctttttatttttgtttgttagctacagtgctttattagacactggaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 agaatggttcgtctttttatttttgtttgttagctacagtgctttattagacactggaat 511
Query: 125 aacctttttagggtataataatttatccagtcaagataactggagctatttccttaagcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 aacctttttagggtataataatttatccagtcaagataactggagctatttccttaagcc 451
Query: 185 tgtgatcagcttgagttttcgtgttaggagatttatactgccgttgcttattaccaaaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tgtgatcagcttgagttttcgtgttaggagatttatactgccgttgcttattaccaaaga 391
Query: 245 aacagttaaaagggatttatggcagtgcacgttatgtatgtgtctggaatttttgtgtgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aacagttaaaagggatttatggcagtgcacgttatgtatgtgtctggaatttttgtgtgt 331
Query: 305 ttaacttctctcctttcctatctctgttttccccctcccttctcttaacattattgtcaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ttaacttctctcctttcctatctctgttttccccctcccttctcttaacattattgtcaa 271
Query: 365 acagagagactatctatacctacaattaaatgcaaattttattcaggcatttaagcagaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 acagagagactatctatacctacaattaaatgcaaattttattcaggcatttaagcagaa 211
Query: 425 tcacat 430
||||||
Sbjct: 210 tcacat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_n16.g1 MSMg01no343_n16.g1 CHROMAT_FILE:
MSMg01no343_n16.g1 PHD_FILE: MSMg01no343_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:51 2005
(391 letters)
>mm_chr3_17901364_17902156
Length = 793
Score = 704 bits (364), Expect = 0.0
Identities = 386/394 (97%), Gaps = 3/394 (0%)
Strand = Plus / Plus
Query: 1 ctccttctctcagctcccaacaaagaatctccagactattctgttctgagtattcagtca 60
|||| ||||| || |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 ctccgtctcttagttcccaacaaagaatctccagactattcttttctgagtattcagtca 260
Query: 61 ctctgggcatctgcttctcttggtggttatcaaaaaatgggttatttgctttgttttg-- 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctgggcatctgcttctcttggtggttatcaaaaaatgggttatttgctttgttttgtt 320
Query: 119 ttgtttttttaactttgattttttttt-taatccagtcattaccccctcctgtttcccat 177
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 ttgtttttttaactttgatttttttttaaaatccagtcattaccccctcctgtttcccat 380
Query: 178 ctgtggacccacatcccattcctcctcgcccctgtttccaagaggatgcccccaccctgt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtggacccacatcccattcctcctcgcccctgtttccaagaggatgcccccaccctgt 440
Query: 238 acattctggacagtccttcccacttcctggggcctcaagcctctcatatatacatatatg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acattctggacagtccttcccacttcctggggcctcaagcctctcatatatacatatatg 500
Query: 298 ctgtatatgtgtccggggccttgtatcacctagtaaatgctgcctggttggtagttcagt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtatatgtgtccggggccttgtatcacctagtaaatgctgcctggttggtagttcagt 560
Query: 358 gtctgagagacctcaggggttcaagttagtgaag 391
||||||||||||||||||||||||||||||||||
Sbjct: 561 gtctgagagacctcaggggttcaagttagtgaag 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 793
Length adjustment: 9
Effective length of query: 382
Effective length of database: 784
Effective search space: 299488
Effective search space used: 299488
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
