Query= MSMg01no344_i09.b1 MSMg01no344_i09.b1 CHROMAT_FILE:
MSMg01no344_i09.b1 PHD_FILE: MSMg01no344_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:44 2005
(519 letters)
>mm_chr3_17137997_17138914
Length = 918
Score = 588 bits (304), Expect = e-172
Identities = 328/336 (97%), Gaps = 1/336 (0%)
Strand = Plus / Minus
Query: 184 acagtgtcccccagatggtctttctgtgtccaggcctcacattgggcaccgcctgtagtc 243
||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 918 acagtgttccccaggtggtctttctgtgtccaggcctcacattgggcaccacctgtagtc 859
Query: 244 atcctttggccacagataaccgggtttacctgaaaggaaaactggggatggaattaggat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 atcctttggccacagataaccgggtttacctgaaaggaaaactggggatggaattaggat 799
Query: 304 gggcagacaagagaaataatgagccaagaaaagggtttatgatcaaggctcaaattttaa 363
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 798 gggcagacaagagaaataatgagccaaggaaagggtttatgatcaaggctcaaattttaa 739
Query: 364 tatacagctctgaatatatatgggaaaatccaaggaacgtccctttgtttcagctggggt 423
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 738 tatacagctctgaatatatatgggaaaatccaaggaacttccctttgtttcagctgggtt 679
Query: 424 ctgttgtttcaacaagattgagttgcaaagtagtctcttcagcaactcagttgggggtcg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ctgttgtttcaacaagattgagttgcaaagtagtctcttcagcaactcagttgggggtcg 619
Query: 484 gggtggggggcagttctcagttctcaagtctctgaa 519
|| |||||| ||||||||||||||||||||||||||
Sbjct: 618 gg-tgggggtcagttctcagttctcaagtctctgaa 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 918
Length adjustment: 10
Effective length of query: 509
Effective length of database: 908
Effective search space: 462172
Effective search space used: 462172
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_i09.g1 MSMg01no344_i09.g1 CHROMAT_FILE:
MSMg01no344_i09.g1 PHD_FILE: MSMg01no344_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:44 2005
(471 letters)
>mm_chr3_16962346_16963217
Length = 872
Score = 878 bits (454), Expect = 0.0
Identities = 466/470 (99%), Gaps = 1/470 (0%)
Strand = Plus / Plus
Query: 1 cacgtgattcaggctcacattgcaggaagcacttatttacatgaattttatcatttttgt 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 cacgtgattcaggctcacattgcaggaaggacttatttacatgaattttatcatttttgt 260
Query: 61 acagggcattttaataattgaaatgatacaagacaaagagatgccatttgcaaaggctgg 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 acagggcattttaataattgaaatgatacaagacaaagagatgctatttgcaaaggctgg 320
Query: 121 aaaacagcaagtgagacatgacagttcaggacaacctgatggcagatgaagctgaggact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaacagcaagtgagacatgacagttcaggacaacctgatggcagatgaagctgaggact 380
Query: 181 caagataagctattaaaattaatttgaggatttagcgaagctgctaggcacaaatttaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagataagctattaaaattaatttgaggatttagcgaagctgctaggcacaaatttaat 440
Query: 241 at-taaagtaaaatgtgttctacatacttgaaataagcaataatagatatgaagtttaaa 299
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atataaagtaaaatgtgttctacatacttgaaataagcaataatagatatgaagtttaaa 500
Query: 300 atgatgcttaggaaagattaagaaaaacattttcttggctgaaactaataaaatgccact 359
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgatgcttaggaaagattaaaaaaaacattttcttggctgaaactaataaaatgccact 560
Query: 360 aaaagaaatgaggacatgtaaaaataaagaaaactcccattgctgtgtagtcagaagtct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaagaaatgaggacatgtaaaaataaagaaaactcccattgctgtgtagtcagaagtct 620
Query: 420 tgcagagcagtgtttcaaagatggtgattatttctttccaaaaagcactg 469
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgcagagcagtgtttcaaagatggtgattatttctttccaaaaagcactg 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 872
Length adjustment: 10
Effective length of query: 461
Effective length of database: 862
Effective search space: 397382
Effective search space used: 397382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
