XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCCT
ACTTCCACTAGTGTGGTGTGAGCCTGCCGTGTTCATGCTCAGTGGACATT
CCTGTTCCCATAGAATTCCTGTCTGCATCCTGGGACAAGAAATGGGAGAC
AGATCAAGGGCATATGTGGATGGCATCACAATATATCCTTTTATTATAGG
AAAGATGTGTGCATCTCAGTTACACACTCATTGTCAGGTTATCTCTCCCA
TCAGTCTGATAGTGAAGATTCATTAGCTGCTAAATTGCTGTTTTATAGCA
AAGATTGATTACTAACTAGAGAGAATGAGTGCTAAGCTGGCAACCATCAC
CGACCTATAAGCATCTAATGAGCACCCCACAAGAGAACAGATCCCCTTTC
TGGTGGTCTTTGCACTGTATTTCACCAAGAGGTTCTTTTTAGAAAATGTT
TTAGCTACTCTGGCAAGAATGTAGCTGTCATCACAAACCAAAGATGGCTC
TTCACGGACTTTAATCTCCACATCTTGTAATTCCGTCATTTCCTAAAGAA
ATTCTCAGAGAAGTTCGCTTTCTGCAAGCTGCAATTTCTGAAGAGCCTGC
CCTTTCTTTTTGTTAGCCGATAAAAACTCTGAGAAATCCTAGGTTAGCCA
GTAAACAGAACAGTCCATGAAAGAAGTCTCTCAAGCAGTAATGCACAAGG
TCCCACTCACAAGATGGAACN

TGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAAAAA
TTCCGTGTTCTGTGGGACAGGTTAATGATGGTAGTCATTTTGATCATCAT
CATCATCCTCATAATCATCATCGTCCTCCNCACCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCNCCCCCCCCCCCNCCCCCCCCCCCNCCCCNCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCNCCTTTCTTCCCCCCCCCCCCCCCCCCC
CCTCCTCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTTTTTC
TTCCCCCCCCNCCCCCCCCCCCCCCTCCCCCCTCTTTCCCCCCCCCCCCC
CCCCCCCCTTTCCCCCCCCCCCCCCTCCCCCCTCCCTCCCCCCCCCCCCC
CCTCCTTCCCCTCCCCCCCCCCCCCCCCCTCCCCCCCCCCCCCCCTCCCT
CTCCCCCCCCTCCCCTCCCCCCCCTCCCCCCCCCCCCCCCCCCTCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCTCCCTTCCCTCCCCCTCCTCCCCCCTC
CCCCCCTCTCCCCCCTCCCCCCCCTCCCCCTCCTCTCCCCCCCCCCCCCT
CCCTCCCCCTTTCCCCCCCCCCCTCTCTCCCCCCCTCTCCCCCCTTCCCC
CCTCTTCCCCTCCCCCCCCCCCCCCCCCCTCCCCTCCCCCTCTCTTTCCC
CCCCCTCCCCCCCCTCCCCCCCCTTCCCCCCTCTCCCTCCCCCCTCCCCC
CCCCCCCCCTTCTACCTCCTTT

Query= MSMg01no345_c13.b1 MSMg01no345_c13.b1 CHROMAT_FILE:
MSMg01no345_c13.b1 PHD_FILE: MSMg01no345_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:33 2005
         (605 letters)



>mm_chr3_119773296_119774300
          Length = 1005

 Score = 1162 bits (601), Expect = 0.0
 Identities = 601/601 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccctacttccactagtgtggtgtgagcctgccgtgttcatgctcagtggacattc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccctacttccactagtgtggtgtgagcctgccgtgttcatgctcagtggacattc 264

                                                                       
Query: 65  ctgttcccatagaattcctgtctgcatcctgggacaagaaatgggagacagatcaagggc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgttcccatagaattcctgtctgcatcctgggacaagaaatgggagacagatcaagggc 324

                                                                       
Query: 125 atatgtggatggcatcacaatatatccttttattataggaaagatgtgtgcatctcagtt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atatgtggatggcatcacaatatatccttttattataggaaagatgtgtgcatctcagtt 384

                                                                       
Query: 185 acacactcattgtcaggttatctctcccatcagtctgatagtgaagattcattagctgct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acacactcattgtcaggttatctctcccatcagtctgatagtgaagattcattagctgct 444

                                                                       
Query: 245 aaattgctgttttatagcaaagattgattactaactagagagaatgagtgctaagctggc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaattgctgttttatagcaaagattgattactaactagagagaatgagtgctaagctggc 504

                                                                       
Query: 305 aaccatcaccgacctataagcatctaatgagcaccccacaagagaacagatcccctttct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaccatcaccgacctataagcatctaatgagcaccccacaagagaacagatcccctttct 564

                                                                       
Query: 365 ggtggtctttgcactgtatttcaccaagaggttctttttagaaaatgttttagctactct 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggtggtctttgcactgtatttcaccaagaggttctttttagaaaatgttttagctactct 624

                                                                       
Query: 425 ggcaagaatgtagctgtcatcacaaaccaaagatggctcttcacggactttaatctccac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggcaagaatgtagctgtcatcacaaaccaaagatggctcttcacggactttaatctccac 684

                                                                       
Query: 485 atcttgtaattccgtcatttcctaaagaaattctcagagaagttcgctttctgcaagctg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atcttgtaattccgtcatttcctaaagaaattctcagagaagttcgctttctgcaagctg 744

                                                                       
Query: 545 caatttctgaagagcctgccctttctttttgttagccgataaaaactctgagaaatccta 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 caatttctgaagagcctgccctttctttttgttagccgataaaaactctgagaaatccta 804

            
Query: 605 g 605
           |
Sbjct: 805 g 805


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space:   592025
Effective search space used:   592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)