XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGT
TTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGGAGTCC
AACTTCTTGAATTCTTTATATATATATTGGATTTTAGTCCCCTATCTCAT
TTAGGATTGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTTTTTGTCTT
ATTGGTGGTGTCTTTTGCCTTACAGAAGCTTTGTAATTTTATGAGGTCCC
ATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGATGTTCTATTCAGG
AATTTTTCCCCTGTGCCCATATCTTAGAGACTTTTCCCTACTTTCTCCTC
TATAAGTATCATTGTCTCTGATATTATGTGGAGTTCCTTGATCCACTTAG
ATTTGACCTTAGTACAAGGAGATAGGAATGGATCAATTCGCATTCTTCTA
CATGATAACCGCCAGTTGTGCCAGCAGCATTTGTTAAAAATGCTGTCTTT
TTTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTAGCCATAGG
TGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGNCTACTTGT
CTGTCGCTATAGCAATACCATGTGGGTTTTATCACCATTGCTCTGTAATA
CCGCTTTAGGTCAGGCACTTGGGGTGACTCTAACTTAGGCAGCGAAAGAT
TTGTTTGATTAAACTTCAAGTCTTTTAAATAAAAACATTCT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCTTCTCATAGCCGTCTGAAATGTTAGTGCATTATT
TATGTTTATAGGCACCCAACTAAAAAAAAATGTCTGGCACAAATTCTTCC
TACTGTCTAACTGTAAATTAGTGCCCATTCATCAATGTCCACCTCATAGG
TCTCTGGTAGCCTCCATTCCACCCTCAACTTCTGTGATATCAACTCTTAT
AGATTCCGTACCTACAAGTGGGTGGTGTTTGTCTTGCTGGCCAGCTTGGT
TTACTAGTACAATGGCCTCCACTTCCGTCCATGAGTCTCAACCAGGCCCC
AGGTACAGAAGCTGAGACTGTAGGGAATGAACACAAGTCCTTTGTCTGTA
CCAAACCAGAGAAACATGGAAAAGAAGAGATTCACAATATGGACAAAGTC
AACTCAGTCATTAATGTATAAACACACACATTGGGTTGTGGTCCTGAATG
TTTGAATGTAATAACTCACTAATCATAAACAATCTGTGCAGTAGGTTCTA
TTCATTCATATGTAAACATATGAGCAATACAAAACAGTAAGCTTAAATAT
TTTGCCAAGGTTAGCCATCTCAAGATCACGATTCTCTGAACTATCTCTTT
ATTCATGTTATGACTCTATTTTGAACTGTATCATTAGCTAGNATTGTAGG
TTTAAGAAACGTTTAAAATATAAAATAAACTTTTATTCAAAATAATAT

Query= MSMg01no346_h14.g1 MSMg01no346_h14.g1 CHROMAT_FILE:
MSMg01no346_h14.g1 PHD_FILE: MSMg01no346_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:11 2005
         (536 letters)



>mm_chr3_79832295_79833230
          Length = 936

 Score = 1021 bits (528), Expect = 0.0
 Identities = 534/536 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttctcatagccgtctgaaatgttagtgcattatttatgtttataggcacccaactaaaa 60
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttctcatagccctctgaaatgttagtgcattatttatgtttataggcacccaactaaaa 260

                                                                       
Query: 61  aaaaatgtctggcacaaattcttcctactgtctaactgtaaattagtgcccattcatcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaatgtctggcacaaattcttcctactgtctaactgtaaattagtgcccattcatcaa 320

                                                                       
Query: 121 tgtccacctcataggtctctggtagcctccattccaccctcaacttctgtgatatcaact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtccacctcataggtctctggtagcctccattccaccctcaacttctgtgatatcaact 380

                                                                       
Query: 181 cttatagattccgtacctacaagtgggtggtgtttgtcttgctggccagcttggtttact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttatagattccgtacctacaagtgggtggtgtttgtcttgctggccagcttggtttact 440

                                                                       
Query: 241 agtacaatggcctccacttccgtccatgagtctcaaccaggccccaggtacagaagctga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtacaatggcctccacttccgtccatgagtctcaaccaggccccaggtacagaagctga 500

                                                                       
Query: 301 gactgtagggaatgaacacaagtcctttgtctgtaccaaaccagagaaacatggaaaaga 360
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 gactgtagggaatgaacacaagtcctttgtctgcaccaaaccagagaaacatggaaaaga 560

                                                                       
Query: 361 agagattcacaatatggacaaagtcaactcagtcattaatgtataaacacacacattggg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agagattcacaatatggacaaagtcaactcagtcattaatgtataaacacacacattggg 620

                                                                       
Query: 421 ttgtggtcctgaatgtttgaatgtaataactcactaatcataaacaatctgtgcagtagg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtggtcctgaatgtttgaatgtaataactcactaatcataaacaatctgtgcagtagg 680

                                                                   
Query: 481 ttctattcattcatatgtaaacatatgagcaatacaaaacagtaagcttaaatatt 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttctattcattcatatgtaaacatatgagcaatacaaaacagtaagcttaaatatt 736


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space:   487076
Effective search space used:   487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)