NTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCATGACTTAACCAAATTCACACAATATCTTTCCATGAATCCAGC
CCTTCAAAGGATAATAAATGGAAAATATGAACACAAAGATGGAAACTACA
CCCTAGAAAAAGCAGGAATGCAATCCTTCAACAAAACAAAAAGAAGACAG
ATACCAGAACAGAATCTCAACTTTAACAAAAAAATGACAGGAAGCAGCAT
TTACTTTAGCTTAATATCTCTTAATATCAATGGATTCTATTCCCCAATAA
AAAGACATAGACTAACAGACTGGCTACATAAACAGGACCCAATATATTGC
TGCATACAGGAAACCCACTTCAGTGACTAAGACAGACACGACTTCAGAGT
AAAAGGCTGAAAAACAAATTTCCAAGCAAATAATCCTAAGAAACTTGATG
GAGTAGCCTTTCTAATAGCAAATAAAATTGACTTCCAACCCAAAGTTATC
AAAAAAGACAAGGAGGGACACTTTATAATCCTCAAAGGTAAAATCTTCCT
AGATGAACTCTTAATTCTGAATATCTGTGCTCCAAATGCAAGGGCAAACA
CATTTCATTACGAAACTGTAGTAAAGCTCAAAGCACACATTGCACCTCAC
ACAATAATAGGGGGAGACTTCCACAACCACTTTTCTTCACGGGCAGAACT
TGGTAAAAAAAAAAAACTATTCCGAGACCCCTTGTAACCTATCGAACCTT
TTGACCCTTTGGGTTTATCCAAAAN

NNNNGGCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCTGACAAGTGAACAC
TGAGTTTTATTTTTGCCTGGGGATTTGTTTCCAGAGCAAAGTTTATTTAC
TACAAATAAATTCTACAATATAGGAAAGTCACAGAAAACCTCAAACAACC
TTGATTTCTATGCAAAATGCAGCACATGCTTGATTGTTCTTATGATTGTT
TTCTCAGAATAAAATCAGAATTTTCATCATAAAATGAATATGATTCTTAT
GTATCATGTGCCTATTTTCTTGATTACACATAATATCTAGTCCACAAAAC
ATGTAATACTAGGGTTGCAGTGTGTGTTGTGGGTATTTATTAGGAACTTG
GTACTTTTGTCCTTTTATTTTACTATGTAAGTACTAATTCCTTTAAAATG
AGACAATGAGAAAAATACTAAATATTGTAGTATTATATACAGTATTATAA
CATGCACTCATAAGTTGCAATATTTATGTGTGTGTCTGTGTGTGCGTATA
TCTATGCATGGGTAAAGGTGATTTATCATATAATGGTGGAGGCTGTCTTT
ATTTGTATTATGAAGTGATATATGGTAAGTTTTTTTCTACTTTGAAATTC
TATTTACATAAGTGGAAATATAATGTATGAATAATGGAATCTGCTGTCCT
TGAGGTAAGGCTAACCCCAATAAAAACGGATAAACACTTTGGGGTTGTTG
GGAAACCG

Query= MSMg01no347_a18.g1 MSMg01no347_a18.g1 CHROMAT_FILE:
MSMg01no347_a18.g1 PHD_FILE: MSMg01no347_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:54 2005
         (478 letters)



>mm_chr3_47749750_47750627
          Length = 878

 Score =  924 bits (478), Expect = 0.0
 Identities = 478/478 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcctgacaagtgaacactgagttttatttttgcctggggatttgtttccagagcaaagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcctgacaagtgaacactgagttttatttttgcctggggatttgtttccagagcaaagt 260

                                                                       
Query: 61  ttatttactacaaataaattctacaatataggaaagtcacagaaaacctcaaacaacctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatttactacaaataaattctacaatataggaaagtcacagaaaacctcaaacaacctt 320

                                                                       
Query: 121 gatttctatgcaaaatgcagcacatgcttgattgttcttatgattgttttctcagaataa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatttctatgcaaaatgcagcacatgcttgattgttcttatgattgttttctcagaataa 380

                                                                       
Query: 181 aatcagaattttcatcataaaatgaatatgattcttatgtatcatgtgcctattttcttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatcagaattttcatcataaaatgaatatgattcttatgtatcatgtgcctattttcttg 440

                                                                       
Query: 241 attacacataatatctagtccacaaaacatgtaatactagggttgcagtgtgtgttgtgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attacacataatatctagtccacaaaacatgtaatactagggttgcagtgtgtgttgtgg 500

                                                                       
Query: 301 gtatttattaggaacttggtacttttgtccttttattttactatgtaagtactaattcct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtatttattaggaacttggtacttttgtccttttattttactatgtaagtactaattcct 560

                                                                       
Query: 361 ttaaaatgagacaatgagaaaaatactaaatattgtagtattatatacagtattataaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaaaatgagacaatgagaaaaatactaaatattgtagtattatatacagtattataaca 620

                                                                     
Query: 421 tgcactcataagttgcaatatttatgtgtgtgtctgtgtgtgcgtatatctatgcatg 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgcactcataagttgcaatatttatgtgtgtgtctgtgtgtgcgtatatctatgcatg 678


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space:   406224
Effective search space used:   406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)