XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCA
GGTGCCTGTAGACATGACCTTATTAAGGGAGAGGAAGTTTACCTGGCTTC
TGGGGGACAAAAACATACGGACGCAAGGCTACTTGGACCAGGACGCAAAC
GGGCTGGGGCTGGGAAGCAGTGCTATTTCTGCCGATTTCAGGATGAGATT
TCGAGGATTTGGACACCTCTTGACTCCACTCTTGCTCCAGGCCAGTCCTT
TCCAATCCCATGGCTCTCTGGCCCTGAATAATTATCTCAGGCCTTTCCAA
GCAGTGGCTGACACCGCTGATTGTGTGATCTCTGGGGCATGAGGGGAATG
GTTGCTGGGACTCTGGGTATTGACTCCTTTCTAGAAGAGTCAAAGTCTAG
TCTACTGCCGAGGCTGCTTGACAATCAGATCAAAGATTGCAGCTGCTAGG
GGGAGGGGCTGGCCCTTGAAGAAATGAGACTGTTTCCCAAAGCTGAAGGC
AAGAGCCTTGGAAGCTGGCCAGCTATGAGTCATCAGGTAGGAGTCATCAG
GAAAGAACTCAGCCCAGGAGCACAGGAATACAGCTAGGGCAAGAACTGAG
GGGCCTTTGTAAAGAAACAGCCGCACTTTATTGGCCGGGTTTAAAAACAG
GATGGAGCTGAAACCTGGGCGAAGGGAGAGCAAATTGAGGAGTGGCCACG
TCCAGCCCTGTAGAAACCGTTTGTTCCCTTG

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAG
CACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAA
AACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAA
ATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTC
CTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGT
CTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCCAGCAA
TACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAGAAGGAC
ACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTG
GAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGT
ACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATG
ACATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGAGAGGT
AAACATTTCCTAAGAAATTTCTACAATATGTATCCCTCGTAAATTGAAAA
TTATTCTCCAACTCAGGATACCCCCGAATTTAGATACATCTCGCAACACC
ATTGAACCTCTTTGATAAAGGACCACCCGAATTTTT

Query= MSMg01no348_b06.b1 MSMg01no348_b06.b1 CHROMAT_FILE:
MSMg01no348_b06.b1 PHD_FILE: MSMg01no348_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:15 2005
         (511 letters)



>mm_chr3_80821068_80821978
          Length = 911

 Score =  928 bits (480), Expect = 0.0
 Identities = 501/508 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccaggtgcctgtagacatgaccttattaagggagaggaagtttacctggcttct 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaggtgcctgtagacatgaccttattaagggagaggaagtttacctggcttct 263

                                                                       
Query: 64  gggggacaaaaacatacggacgcaaggctacttggaccaggacgcaaacgggctggggct 123
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gggggacaaaaacatagggacgcaaggctacttggaccaggacgcaaacgggctggggct 323

                                                                       
Query: 124 gggaagcagtgctatttctgccgatttcaggatgagatttcgaggatttggacacctctt 183
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 324 gggaagcagtgctatttctgccgatttcaggatgagatttcaaggatttggacacctctt 383

                                                                       
Query: 184 gactccactcttgctccaggccagtcctttccaatcccatggctctctggccctgaataa 243
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 384 gactccactcttgctccaggccagtcctctccaatcccatggctctctggccctgcataa 443

                                                                       
Query: 244 ttatctcaggcctttccaagcagtggctgacaccgctgattgtgtgatctctggggcatg 303
           || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 444 ttttctcaggcctttccaagcagtggctgacactgctgattgtgtgatctctggggcatg 503

                                                                       
Query: 304 aggggaatggttgctgggactctgggtattgactcctttctagaagagtcaaagtctagt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aggggaatggttgctgggactctgggtattgactcctttctagaagagtcaaagtctagt 563

                                                                       
Query: 364 ctactgccgaggctgcttgacaatcagatcaaagattgcagctgctagggggaggggctg 423
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 564 ctactgccgaggctgcttgacaatcagatcaaagattgcagcttctagggggaggggctg 623

                                                                       
Query: 424 gcccttgaagaaatgagactgtttcccaaagctgaaggcaagagccttggaagctggcca 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gcccttgaagaaatgagactgtttcccaaagctgaaggcaagagccttggaagctggcca 683

                                       
Query: 484 gctatgagtcatcaggtaggagtcatca 511
           ||||||||||||||||||||||||||||
Sbjct: 684 gctatgagtcatcaggtaggagtcatca 711


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space:   451401
Effective search space used:   451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)