XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACA
TGTTTGGTTGTTTCTTTCCTTTGGAGACATTTTCCCCTCAAAATTGTTCA
TGTTGTATTTGAACCTTTTTGTTCAATGCTTCTAATTTTGCTATCAGATT
GAATGTAACATGTTTGAGAACTGACCTGTTTTGTCTGATAACATCTCTGA
CAAGAGGGAAAGCTGTCATTTATCAAATCAATGCATGGATGAGACTCCCA
GAGAGGAGGTAGTGAGATCCTCTGCAATGGGTGGAAAGTTTAACGTCCTG
TTTTTGGTGACAGGATTCCAGTTCATGAGAATCTGATATGAAATCCTATA
CCTTCCATCCTACTGTGATAATGGCCCCATGCCCATTTTCTATTTCCTGC
TTCAGAAAGCTCAATTATTTCCTATTTCCTACAGCATTAAATCGAAACTT
CTCTGCCTGAATTTCAAATCCTTCCATAATCTGGGCAGTTATATTATTCT
AAGTTGCATCTTTATGAAAAACTACTGAACAAACAAATTATAGGACAAAT
GAAATGCTGGCAAAATCTGTATAATATAATGACTTGCAGGTTGTTTATTA
TTAACAATTAGTTTAATAGTAGGAAACAGCATGATCTAGACTCTCCAATA
CCAATATGAAAAGTCTGCGTGAGGGGAAAATGGGTTTCTTGAACACAGGA
GGTGGTATGAAACCACAAACTGCTGCCTGGATTTCCAAAGACAAAA

AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXAGAAAATCACTGAATTAAAGAATAATATAA
TTTACATCACTACCTGATGGAGAATGAGGTTACCAGAAATACTTTGACTG
TATCTGTATAATGCCAGGTATTTGTCTAAACATTAAACTGTTCTTTTACT
TGGCATAGTGAAGTTTAGCTCTGTGATGTCTAAACCATGGAAGCTATCAG
TGATTTTTGAATCTATGACCTTTTCTGGGGAGAAATATAAGAGATCTGGG
TGCTGTGATGGTAGGTGTGTAATAAACTGAGAAACCTGCATTGTCTTTTG
CTGATACTCATGGGATTCACTAAAACTGATTTTCTGTTGGGAGGATTTTG
ATATCTATATTGATACTTTATTTTCAGTTATTTTGTCACAGATAAATACT
ACATTGAAACAATAAAATTTTGTCCATTCCTTAAAAAAGTAAATCCTCTG
TATTAAAGCTTCATTATTATAGATACAACAATTAAATAAGTAACATTTTT
TTCTAAATTAGGGAGATTTAAATGATCACTACCCAGGGACAATGGTTATA
TTAACACCAGAATTCTGATAAATAAATGGCAAGAACATTAACTGGGTTCC
TTCCTACTGGAATTGAACCCACCACCTCCCCTAAGTAGAACAAACCTCCT
TCTGTTGAGTTGCATCCCACACTGGGCAAAAAAGTATTGAA

Query= MSMg01no348_f18.b1 MSMg01no348_f18.b1 CHROMAT_FILE:
MSMg01no348_f18.b1 PHD_FILE: MSMg01no348_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:37 2005
         (515 letters)



>mm_chr3_158080267_158081180
          Length = 914

 Score =  909 bits (470), Expect = 0.0
 Identities = 500/510 (98%), Gaps = 3/510 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacatgtttggttgtttctttcctttggagacattttcccctcaaaattgttcat 64
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacatggttggttgtttctttcctttggagacattttcccctcaaaattgttcat 264

                                                                       
Query: 65  gttgtatttgaacctttttgttcaatgcttctaattttgctatcagattgaatgtaacat 124
           |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 265 gttgtatttgaaccttttcgttcaatgcttttaattttgctatcagattgaatgtaacat 324

                                                                       
Query: 125 gtttgagaactgacctgttttgtctgataacatctctgac-aagagggaaagctgtcatt 183
           |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 325 gtttgagaactgacctgttttgtctgataacatctctgacaaagaggg-aagctgtcatt 383

                                                                       
Query: 184 tatcaaatcaatgcatggatgagactcccagagaggaggtagtgagatcctctgcaatgg 243
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtcaaatcaatgcatggatgagactcccagagaggaggtagtgagatcctctgcaatgg 443

                                                                       
Query: 244 gtggaaagtttaacgtcctgtttttggtgacaggattccagttcatgagaatctgatatg 303
           |||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 444 gtggaaag-ttaatgtcctgtttttggtgacaggattccagttcatgaggatctgatatg 502

                                                                       
Query: 304 aaatcctataccttccatcctactgtgataatggccccatgcccattttctatttcctgc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aaatcctataccttccatcctactgtgataatggccccatgcccattttctatttcctgc 562

                                                                       
Query: 364 ttcagaaagctcaattatttcctatttcctacagcattaaatcgaaacttctctgcctga 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttcagaaagctcaattatttcctatttcctacagcattaaatcgaaacttctctgcctga 622

                                                                       
Query: 424 atttcaaatccttccataatctgggcagttatattattctaagttgcatctttatgaaaa 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 623 atttcaaatccttccataatctgggcagttatattattctaagttgcatctttataaaaa 682

                                         
Query: 484 actactgaacaaacaaattataggacaaat 513
           ||||||||||||||||||||||||||||||
Sbjct: 683 actactgaacaaacaaattataggacaaat 712


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 914
Length adjustment: 10
Effective length of query: 505
Effective length of database: 904
Effective search space:   456520
Effective search space used:   456520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)