XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
GATCATGATGTGAAATGTTTCGAATCTGACCCTGAGAGACTCTAAGGCAC
CCATTGTTCTTTCTGGAATTTCATGATTTTTTGGAACCTAGACCCACAAT
GTAAAATGTTTCAGTTTTGACCCTTGGCAACTCTAAGGAGTCCTTCATTC
TTTCCAGCCTGGGAATGACCCTTGCTTCCACTCAGCAAGCACAGAGCTGA
AAGGAGAAGAAATCCACATATTGCCCCGTGAAAACTAGAATTGGCTATGG
ATTCCAATCTTCTCTAGGAAAGGCGGGCATGATGCTCTCTCTCAGGAAGA
TGACTATCTCAGAGCTTACAGTGCACACGAAATTGGAAAGGGATGCTGAC
TCTCCCTGTCCTCTCAAACAATCTTTCCCACCATTAATGGCTCCCAGGAG
GCAGATATTGCATGCTCTTAGGACAACAAGAGAAAAGCTATGCGATAGCG
AATTCAAAAGGGAAGGCATGGTATTTATGATAGTGCAGTATTTCACACCA
CCCAGAAGTCATCATTTGTAACAACATGTAAGGAAGCAACTGTTTTTCCT
GAGTGAATCCTACAAAAATTAAGAAGGCCTAGAATCTCCTGAGGATGGGA
CCTGGTTTCCTCCATGTTTACCTGTTTGCTCCTGAGCAGATAGAACCTGA
AGCCCATGTTCCACATTATCTCTAGACCAGTGG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTCCTTAATTATTCATATGTGTGTG
TGTGTGTGTGTGTGTGTGAGAAAGAGAGACAGAGAGACAGAGAGAGAGAG
AGAACTGGGAGATAAAAGGGGAGACATTTGCTTCATAATCAGTACGTTGA
ATAAAAAGTCCACACATCAGTGCAGAAGGCCATCATCCAATTTGTGAGGG
TCCAAATAGAGCAAAAGGCTGAGGAAGGGCAACTGCATTATCTTGGGGGA
ACTGGCACAGCCATCTTTTGCAGCCTTCAGACATAGGCACCACATGTTGT
CAGGCCTTTGGACTTGGACCAAAGCTTTGCCACCAGCTTTCCTGGGCAAC
CAGCTGGCAGACAGAAGATGGAGGGACTTCTTAGCCCTCAGTCTTATTAT
TATATGATCTAGTTTTAGATCATATTAAGAATTTTCACAATTAATTCATC
CGTATGTCTGCATATCCTGTTGGTTATGTTTCTCTGGAGATTCCAATACA
ACTATAACTATAAAAGAACCCTGTTTCTCAGTGCTAGAAAACACACATAA
AATTTTTTTTTAAAAAAAAGGCCATGCTATCAACACAGGTGACTTCTATT
AACACTCTGAAATAGCCCCTTTAGCCATTCCCATATACTAGCTGTGTATA
CATAGCTAGTGGTTAAAGGTGGTTTTGATTACCTTTCCAATTGTTCCCAT
GGGGAACTTTT

Query= MSMg01no349_c12.b1 MSMg01no349_c12.b1 CHROMAT_FILE:
MSMg01no349_c12.b1 PHD_FILE: MSMg01no349_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:41 2005
         (647 letters)



>mm_chr3_65371736_65372782
          Length = 1047

 Score = 1237 bits (640), Expect = 0.0
 Identities = 643/644 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcagatcatgatgtgaaatgtttcgaatctgaccctgagagactctaaggcaccc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 ggaattcagatcatgatgtgaaatgtttcgaatctgaccctgagagactctaaggcaccc 788

                                                                       
Query: 64  attgttctttctggaatttcatgattttttggaacctagacccacaatgtaaaatgtttc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 attgttctttctggaatttcatgattttttggaacctagacccacaatgtaaaatgtttc 728

                                                                       
Query: 124 agttttgacccttggcaactctaaggagtccttcattctttccagcctgggaatgaccct 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 agttttgacccttggcaactctaaggagtccttcattctttccagcctgggaatgaccct 668

                                                                       
Query: 184 tgcttccactcagcaagcacagagctgaaaggagaagaaatccacatattgccccgtgaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tgcttccactcagcaagcacagagctgaaaggagaagaaatccacatattgccccgtgaa 608

                                                                       
Query: 244 aactagaattggctatggattccaatcttctctaggaaaggcgggcatgatgctctctct 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aactagaattggctatggattccaatcttctctaggaaaggcgggcatgatgctctctct 548

                                                                       
Query: 304 caggaagatgactatctcagagcttacagtgcacacgaaattggaaagggatgctgactc 363
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 547 caggaagatgactatctcagagcttacagtgcacatgaaattggaaagggatgctgactc 488

                                                                       
Query: 364 tccctgtcctctcaaacaatctttcccaccattaatggctcccaggaggcagatattgca 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tccctgtcctctcaaacaatctttcccaccattaatggctcccaggaggcagatattgca 428

                                                                       
Query: 424 tgctcttaggacaacaagagaaaagctatgcgatagcgaattcaaaagggaaggcatggt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tgctcttaggacaacaagagaaaagctatgcgatagcgaattcaaaagggaaggcatggt 368

                                                                       
Query: 484 atttatgatagtgcagtatttcacaccacccagaagtcatcatttgtaacaacatgtaag 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 atttatgatagtgcagtatttcacaccacccagaagtcatcatttgtaacaacatgtaag 308

                                                                       
Query: 544 gaagcaactgtttttcctgagtgaatcctacaaaaattaagaaggcctagaatctcctga 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gaagcaactgtttttcctgagtgaatcctacaaaaattaagaaggcctagaatctcctga 248

                                                       
Query: 604 ggatgggacctggtttcctccatgtttacctgtttgctcctgag 647
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ggatgggacctggtttcctccatgtttacctgtttgctcctgag 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space:   660569
Effective search space used:   660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)