Query= MSMg01no349_e22.b1 MSMg01no349_e22.b1 CHROMAT_FILE:
MSMg01no349_e22.b1 PHD_FILE: MSMg01no349_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:52 2005
(586 letters)
>mm_chr3_60303406_60304391
Length = 986
Score = 1096 bits (567), Expect = 0.0
Identities = 579/583 (99%)
Strand = Plus / Plus
Query: 4 ggaattcagagttaactggctaatgggctgtgaatatctcccattctctacctgatccca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagagttaactggctaatgggctgtgaatatctcccattctctacctgatccca 263
Query: 64 gcactgtggttacagacacttgcctagatgttcggaatttgaactcaggttctcagacct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcactgtggttacagacacttgcctagatgttcggaatttgaactcaggttctcagacct 323
Query: 124 gagctccagcttctttatgcaggagtcatctccctagccagctagcctctccaggcaact 183
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 324 gagctccagcttctttacgcaggagtcatctccctagccagctagcctatccaggcaact 383
Query: 184 ctctttttatcttagcaacttctgcacatccttcaaggcgctgcttgcataagttcctcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctctttttatcttagcaacttctgcacatccttcaaggcgctgcttgcataagttcctcc 443
Query: 244 agggagccttccctccttttctcaagggcattttggatatttgcctaccatcttagcacc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agggagccttccctccttttctcaagggcattttggatatttgcctaccatcttagcacc 503
Query: 304 agctggctggtgctcttttctaccatgctgctccaaaaagtacaatccgtgtactccatc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agctggctggtgctcttttctaccatgctgctccaaaaagtacaatccgtgtactccatc 563
Query: 364 ctcctgcacttacctccatcctacctatacttaactacttctgccatagctcacattcca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctcctgcacttacctccatcctacctatacttaactacttctgccatagctcacattcca 623
Query: 424 cccagttgctggaatgaatgctgagaaagtcctcaggcgctggtggttactaattgtcag 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tccagttgctggaatgaatgctgagaaagtcctcaggcgctggtggttactaattgtcag 683
Query: 484 ttagaaactccctgtctctgttctctgagaaaatgctagtgtcattctactttgtttcca 543
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 684 ttagaaactccctgtctctgttctctgagaaaatgctactgtcattctactttgtttcca 743
Query: 544 ttgttggggacttgggaacttttaataattaacactgagaagt 586
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ttgttggggacttgggaacttttaataattaacactgagaagt 786
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_e22.g1 MSMg01no349_e22.g1 CHROMAT_FILE:
MSMg01no349_e22.g1 PHD_FILE: MSMg01no349_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:53 2005
(428 letters)
>mm_chr3_60311484_60312312
Length = 829
Score = 791 bits (409), Expect = 0.0
Identities = 424/429 (98%), Gaps = 1/429 (0%)
Strand = Plus / Minus
Query: 1 attctccaaagggttagcattattagtacctatattctcatctctattctgtaactaaca 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 attctccaaacggttagcattattagtacctatattctcatctctattctgtaactaaca 435
Query: 61 ttggggacaagatgtattaaagggttaaaatgtgtatattg-aaaaaaaaatcacatctt 119
||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 434 ctggggacaagatggattaaagggttaaaatgtgtatattgaaaaaaaaaatcacatctt 375
Query: 120 ctggttctagaaataacaaaaaggtcccagtcatgctaattaccccctaagacaaaagtc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctggttctagaaataacaaaaaggtcccagtcatgctaattaccccctaagacaaaagtc 315
Query: 180 ctaagatctatgctatagttgtagagaatatttaaggagattttataaagcaatatacaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ctaagatctatgctatagttgtagagaatatttaaggagattttataaagcaatatacaa 255
Query: 240 gtagcaacttatacttttggttgtgagcctacctttaatgggtgagccatctatgaccca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gtagcaacttatacttttggttgtgagcctacctttaatgggtgagccatctatgaccca 195
Query: 300 tggctacagccgtatatgtagcagaggatgaccttgttgggcaacactgggaggagaggc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tggctacagccgtatatgtagcagaggatgaccttgttgggcaacactgggaggagaggc 135
Query: 360 ccttacttctatgaaggcttgatgcacaaatggaggggaatgacaatgtggggaggcagg 419
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ccttactcctatgaaggcttgatgcacaaatggaggggaatgacaatgtggggaggcagg 75
Query: 420 agtgggtga 428
|||||||||
Sbjct: 74 agtgggtga 66
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 829
Length adjustment: 9
Effective length of query: 419
Effective length of database: 820
Effective search space: 343580
Effective search space used: 343580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
