Query= MSMg01no350_p02.b1 MSMg01no350_p02.b1 CHROMAT_FILE:
MSMg01no350_p02.b1 PHD_FILE: MSMg01no350_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:03 2005
(128 letters)
>mm_chr3_98563035_98563561
Length = 527
Score = 207 bits (107), Expect = 2e-58
Identities = 122/127 (96%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 1 tcttggaatctctagcttgttcacatcatagtgaaccatgaatcaaataacaaatgtaca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 326 tcttggaatctctagcttgttcacatcatagtgaaccatgaatcaaataacaaatgtaga 267
Query: 61 accatggttgaactttttccttcaaagacatgctactacaggttcgcaatgtccgtcagt 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |
Sbjct: 266 accatggttgaactttttccttcaaagacatgctactacagcttcgcaatgtca-tcact 208
Query: 121 ggctttc 127
|||||||
Sbjct: 207 ggctttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 128
Length of database: 527
Length adjustment: 8
Effective length of query: 120
Effective length of database: 519
Effective search space: 62280
Effective search space used: 62280
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no350_p02.g1 MSMg01no350_p02.g1 CHROMAT_FILE:
MSMg01no350_p02.g1 PHD_FILE: MSMg01no350_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:03 2005
(394 letters)
>mm_chr3_98188838_98189633
Length = 796
Score = 704 bits (364), Expect = 0.0
Identities = 380/386 (98%), Gaps = 2/386 (0%)
Strand = Plus / Plus
Query: 11 aaagaaagaaagaaagaaagaaagaaaggaagaaaggaaggaaggaaagaattcctagtt 70
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 211 aaagaaagaaagaaagaaagaaagaaagaaagaaagggaggaaggaaagaattcctagtt 270
Query: 71 actatcaagcttttcctcatggtattttgaattttggtgacacctctccctgtctgttat 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 actatcaagcttttcctcatggtattttgaattttggtgacacctctccctgtctgttat 330
Query: 131 gag--ctcatcttgttccccttaaaattataaaattccttgaggacaataacttgttctg 188
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gagagctcatcttgttccccttaaaattataaaattccttgaggacaataacttgttctg 390
Query: 189 cctgatgtttataactagcagatgcacaaaggatgtttaattggaagtttgtaaataaat 248
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cctgatgtttataactagcagatgcacaaaggatgtttaattggaagtttgtaaataaac 450
Query: 249 gaaagcaatgaaataacatatacatcgtgtatttacttatagatcaggtctcatgtagcc 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gaaagcaatgaaataacatatacatcgtgtatttacttatagatcaggtctcatgtagcc 510
Query: 309 caggctagcttccaactcattgtgtagccaaggatgactgaaaggctctatggctcctat 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 511 caggctagcttccaactcattgtgtagccaaggatgactgaaaggctctatggctcccat 570
Query: 369 ccttcttgcctctgtctcttgaatgc 394
||||||||||||||||||||||||||
Sbjct: 571 ccttcttgcctctgtctcttgaatgc 596
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 796
Length adjustment: 9
Effective length of query: 385
Effective length of database: 787
Effective search space: 302995
Effective search space used: 302995
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
