Query= MSMg01no351_e22.b1 MSMg01no351_e22.b1 CHROMAT_FILE:
MSMg01no351_e22.b1 PHD_FILE: MSMg01no351_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:31 2005
(508 letters)
>mm_chr3_87773788_87774695
Length = 908
Score = 951 bits (492), Expect = 0.0
Identities = 498/500 (99%), Gaps = 1/500 (0%)
Strand = Plus / Plus
Query: 9 tcagaaatccgcctgcctttgcctcccaagtgctgggattaaagacatgtgccaccactg 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tcagaaatccgcctgcctttgcctcccaagtgctgggattaaagacatgtgccaccactg 269
Query: 69 cccggccccaatcttttttaaacaggtcctccacctggggagcaagcattcaaatatttg 128
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cccggccccaatcttttt-aaacaggtcctccacctggggagcaagcattcaaatatttg 328
Query: 129 agcctgaaatattggtcccttgtagaaaatctacagcttcatttctttcttcgccaaact 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 agcctgaaatattggtcccttgtagaaaatctacagcttcatttctttcttcgccaaact 388
Query: 189 tcatgcttagccaccagggggctctcttgagagccgcgtaacttcttcactaaatgacaa 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tcatgcttagccaccagggggctctcttgagagccgcgtaacttcttcactaaatgacaa 448
Query: 249 gagggatcgaacttcaaaggagaaaaactttcccttgctagtctccttttcctggtgcgg 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gagggatcgaacttcaaaggagaaaaactttcccttgctagtctccttttcctggtgcgg 508
Query: 309 ggtagggtagggtaggacgtccctctgcgggtacgaactgggcattgtgtctgctaacat 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggtagggtagggtaggacgtccctctgcgggtacgaactgggcattgtgtctgctaacat 568
Query: 369 caactgggcaggggtactggcacaggcatttaatcccagcactggggaagctatggcagg 428
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 taactgggcaggggtactggcacaggcatttaatcccagcactggggaagctatggcagg 628
Query: 429 agcgtccctgagacctgcctgatctacatagccataccaaccatctgaagaaaaggggtg 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 agcgtccctgagacctgcctgatctacatagccataccaaccatctgaagaaaaggggtg 688
Query: 489 gtggtggtgtttactaccca 508
||||||||||||||||||||
Sbjct: 689 gtggtggtgtttactaccca 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_e22.g1 MSMg01no351_e22.g1 CHROMAT_FILE:
MSMg01no351_e22.g1 PHD_FILE: MSMg01no351_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:31 2005
(457 letters)
>mm_chr3_87917604_87918460
Length = 857
Score = 822 bits (425), Expect = 0.0
Identities = 449/457 (98%)
Strand = Plus / Minus
Query: 1 ctggcctgtgttgataaggcagctgtccgaagtctgtgcaagccggacactaagttccat 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 ctggcctgcgttgataaggcagctgtccgaagtctgtgcaagccggacactaagttccat 764
Query: 61 gccccagactcacgtaaagatggaagtcattcagaagaactgagtgcacaaggctgttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 gccccagactcacgtaaagatggaagtcattcagaagaactgagtgcacaaggctgttct 704
Query: 121 ggcctccacacgtgtgccgtgtgacatgtgctcctccaatcacacatgtacatacacagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ggcctccacacgtgtgccgtgtgacatgtgctcctccaatcacacatgtacatacacagg 644
Query: 181 aggtcccgtctccaaaagtaagtgagtcaaagtacagtctgcaagcaccctgctgcctca 240
||||||||| |||||||||||||||| ||||| | |||||||||||||||||||||||||
Sbjct: 643 aggtcccgtatccaaaagtaagtgagccaaagcatagtctgcaagcaccctgctgcctca 584
Query: 241 ggctcctgatcgtcccatgccttcagctacaactccaaggaaaggctgagcgcttgccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 583 ggctcctgatcgtcccatgccttcagctacaactccaaggaaaggctgagcacttgccca 524
Query: 301 agactattctgagcacggagatcgtgagctaggcttcagggagaactttctgaagaatgg 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 agactattctgagtacggagatcgtgagctaggcttcagggagaactttctgaagaatgg 464
Query: 361 cggtaggggaggggtggcaacaaggaagtatgacagccctctctgagtgggggccctgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cggtaggggaggggtggcaacaaggaagtatgacagccctctctgagtgggggccctgta 404
Query: 421 tagggaggaggcctacctgggcctccacacccacctc 457
||||||||||| |||||||||||||||||||||||||
Sbjct: 403 tagggaggagggctacctgggcctccacacccacctc 367
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
