Query= MSMg01no352_c07.b1 MSMg01no352_c07.b1 CHROMAT_FILE:
MSMg01no352_c07.b1 PHD_FILE: MSMg01no352_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:34 2005
(521 letters)
>mm_chr3_145480895_145481815
Length = 921
Score = 926 bits (479), Expect = 0.0
Identities = 506/521 (97%), Gaps = 10/521 (1%)
Strand = Plus / Plus
Query: 1 gtcacacactcagccttgcctcaactattcacttcacacaagcatacatcttctctttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtcacacactcagccttgcctcaactattcacttcacacaagcatacatcttctctttgg 260
Query: 61 tacacacagggacaaacctgcacacactaaacagtaaggaagccaatgagatggagccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacacacagggacaaacctgcacacactaaacagtaaggaagccaatgagatggagccat 320
Query: 121 tggtctgagcactgagccacagtctcagtaaaggtggttccaagaagaggatttcatgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggtctgagcactgagccacagtctcagtaaaggtggttccaagaagaggatttcatg-- 378
Query: 181 ggtaactgcagcgtccaacacagagccccacacagcaccagccatcagcccacatctgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 --------cagcgtccaacacagagccccacacagcaccagccatcagcccacatctgtc 430
Query: 241 tactgagtgagtgtgtaagccagcagatgaaggcaatgcacatttgatgttctgaagttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tactgagtgagtgtgtaagccagcagatgaaggcaatgcacatttgatgttctgaagttt 490
Query: 301 tgtgtggattgtctgagactcctagttaaagacgcaataggaagtaatgaacatgtgatg 360
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 491 tgtgtggattgtctgagactcctagttaaagacgcaatagtaagtaatgaacatctgatg 550
Query: 361 aacattggctgggcaggaatcatgctctgtcactgagctacatccccagcctccgagcgc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 551 aacattggctgggcaggaatcatgctctgtcactgagctacatccccagcctccgagcac 610
Query: 421 cttacatacactgtgtttaccatctcagtttttaatgtggatcctacattgaagaaactg 480
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 611 cttacatacaatgtgtttaccatctcagtttttaatgtgaatcctacattgaagaaactg 670
Query: 481 aggctttgagtataagtaggttgcatggtcggctaggcaat 521
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aggctttgagtataagtaggttgcatggtcggctaggcaat 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_c07.g1 MSMg01no352_c07.g1 CHROMAT_FILE:
MSMg01no352_c07.g1 PHD_FILE: MSMg01no352_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:34 2005
(419 letters)
>mm_chr3_145618908_145619726
Length = 819
Score = 779 bits (403), Expect = 0.0
Identities = 415/419 (99%)
Strand = Plus / Minus
Query: 1 tccttggctccaaaacaagtccaaagatattttgtgttatacgagacactggctcaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tccttggctccaaaacaagtccaaagatattttgtgttatacgagacactggctcaaaaa 484
Query: 61 gtaaaataaaattaattttaaaaagttattaacttttgtaatatttaagttcttctacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gtaaaataaaattaattttaaaaagttattaacttttgtaatatttaagttcttctacct 424
Query: 121 aaaacatgttatattcttcactttagaacaatcttatcattaaaaaacccctataatttc 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aaaacacgttatattcttcactttagaacaatcttatcattaaaaaacccctataatttc 364
Query: 181 tagacatattttacgtttcacattttcgaaactatttatttactgtgtgtgtgtgtgtgt 240
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||
Sbjct: 363 tagacatattttacgtttcacattttcgaaactatttatttattttgtgtgtgtgtgcgt 304
Query: 241 ctatatgtgtgcacacatgccatagtgtacacatagagatcagagttggttccctctttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctatatgtgtgcacacatgccatagtgtacacatagagatcagagttggttccctctttc 244
Query: 301 taccatgtaggttctggtgtctgaggtaaggtcatccggctggacaaaagtgtccttaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 taccatgtaggttctggtgtctgaggtaaggtcatccggctggacaaaagtgtccttaca 184
Query: 361 cactgagccgtcttgctggccctcgttttcttagtatacgtatctaatctttcctgtta 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 cactgagccgtcttgctggccctcgttttcttagtatacgtatctaatctttcctgtta 125
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
