Query= MSMg01no352_n03.b1 MSMg01no352_n03.b1 CHROMAT_FILE:
MSMg01no352_n03.b1 PHD_FILE: MSMg01no352_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:30 2005
(370 letters)
>mm_chr3_147275501_147276270
Length = 770
Score = 582 bits (301), Expect = e-170
Identities = 307/309 (99%)
Strand = Plus / Minus
Query: 62 ttccatccgaaagtatcaacaggaaacttcttcctcccttttccatgggtaagtccttta 121
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 770 ttccatccgaaagtatcaacaggaaacttgttcctcccttttccatgggtaagtccttta 711
Query: 122 cataaattggggtggtgactgcatgtgacctctgcctccgtatgctttaaatcattctgt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 cataaattggggtggtgactgcatgtgacctctgcctccgtatgctttaaatcattctgt 651
Query: 182 gatacttatagtggcagacacaatggaagtgttgtgcaaatagttaactttgtttggaga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gatacttatagtggcagacacaatggaagtgttgtgcaaatagttaactttgtttggaga 591
Query: 242 attgtgaagaccaagtctgtgaattttagcggtggcaaatattttcctgagtccatggat 301
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 590 attgtgaagaccaagtctgtgaattttagcagtggcaaatattttcctgagtccatggat 531
Query: 302 atacaagccatgttcacagaggcatggcagtttagctactgcagggaaagttcagagata 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 atacaagccatgttcacagaggcatggcagtttagctactgcagggaaagttcagagata 471
Query: 362 ttccagcac 370
|||||||||
Sbjct: 470 ttccagcac 462
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_n03.g1 MSMg01no352_n03.g1 CHROMAT_FILE:
MSMg01no352_n03.g1 PHD_FILE: MSMg01no352_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:30 2005
(415 letters)
>mm_chr3_147108940_147109754
Length = 815
Score = 731 bits (378), Expect = 0.0
Identities = 406/416 (97%), Gaps = 4/416 (0%)
Strand = Plus / Plus
Query: 1 atctgtttaaccacaaaacgtcggttaggaaagaaagaattcagcggagaaagtgatagt 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctgtttaaccacaaaatgtcggttaggaaagaaagaattcagcggagaaagtgatagt 260
Query: 61 caaggccagcccatgtgagttgactggaaatctggttaaagagaaaaaaagatgactaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaggccagcccatgtgagttgactggaaatctggttaaagagaaaaaaagatgactaaa 320
Query: 121 aatcaggtgaaagctactgctggctatctaatgagaaaagaggcaagccaaggtgaaaca 180
||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 321 aatcaggtgaaagctactgctggctatctaatgagaagcgaggcaagccaaggcgaaaca 380
Query: 181 ccattgccagccccctccctgacgagtgattccatacattaaggatacccacgctaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccattgccagccccctccctgacgagtgattccatacattaaggatacccacgctaaaca 440
Query: 241 gttgtcttcagtctaagcatgatgcctctctctctcaactcctccccactcttttattag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttgtcttcagtctaagcatgatgcctctctctctcaactcctccccactcttttattag 500
Query: 301 taaaagagttttaaatgtattttcgcttgtgtgtgtgccggctttctggatgtggactgt 360
||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 501 taaaagagttttaaatgtatttttgcttgtgtgtgt--cggctttctggatgtggactgt 558
Query: 361 gatacagagtctagaagagggtagt-ctcagatctcctggagctagagttgcaggc 415
|||||||||||||||||||||| || |||||||||||||||||||||||| |||||
Sbjct: 559 gatacagagtctagaagagggt-gttctcagatctcctggagctagagttacaggc 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
