Query= MSMg01no352_p22.b1 MSMg01no352_p22.b1 CHROMAT_FILE:
MSMg01no352_p22.b1 PHD_FILE: MSMg01no352_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:44 2005
(368 letters)
>mm_chr3_14849514_14850281
Length = 768
Score = 683 bits (353), Expect = 0.0
Identities = 362/365 (99%), Gaps = 2/365 (0%)
Strand = Plus / Minus
Query: 5 gaattctcaagctatta-tctcagcaccatgtctgcttccatgcaggcaggctttcagtc 63
||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaattctcaagctataagt-tcagcaccatgtctgcttccatgcaggcaggctttcagtc 683
Query: 64 atgatcaccgtggactaaaactctgaaactgtaagccagccacaattaaatgctttcctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 atgatcaccgtggactaaaactctgaaactgtaagccagccacaattaaatgctttcctt 623
Query: 124 tataggagttgccttggttctggtgcctcttcacagcaatagaacactggctaattgaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tataggagttgccttggttctggtgcctcttcacagcaatagaacactggctaattgaaa 563
Query: 184 tatatgaaaagataatacatgtaacacacttggaattttaatagacattcaataattact 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tatatgaaaagataatacatgtaacacacttggaattttaatagacattcaataattact 503
Query: 244 agctaataaaaaggaaccataaagtagatacaattatgttccggttaaccagctcctagt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 agctaataaaaaggaaccataaagtagatacaattatgttccggttaaccagctcctagt 443
Query: 304 taaatgaaggcttcatagagaagaatcctgcttttgttcagaaccacatagtgtgtatgt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 taaatgaaggcttcatagagaagaatcctgcttttgttcagaaccacatagtgtgtatgt 383
Query: 364 tgttt 368
|||||
Sbjct: 382 tgttt 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_p22.g1 MSMg01no352_p22.g1 CHROMAT_FILE:
MSMg01no352_p22.g1 PHD_FILE: MSMg01no352_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:44 2005
(404 letters)
>mm_chr3_14673945_14674748
Length = 804
Score = 704 bits (364), Expect = 0.0
Identities = 394/404 (97%)
Strand = Plus / Plus
Query: 1 ttctaagctcagaaccccttggtccccaaatctaaaccttggaagaaaacactgtgccct 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 ttctaagctcagaaccccttggtccccaaatctaaaccttggaagaaatcactgtgccct 260
Query: 61 gtaatacaactttacatgtgctgcactaagctaaagccagggtttgtatctttctggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaatacaactttacatgtgctgcactaagctaaagccagggtttgtatctttctggaag 320
Query: 121 aagtaattagttacttgaaaagtactaaaccattgctaggaatctatttcatgagtgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtaattagttacttgaaaagtactaaaccattgctaggaatctatttcatgagtgttt 380
Query: 181 tctaaaaagttggtgaaagaaccaactatacaaacagctcctattggtctataaattgga 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctaaaaagttggtgcaagaaccaactatacaaacagctcctattggtctataaattgga 440
Query: 241 aaattaaaatctgcagaaaaaagacgaatagggaccctatcccaacaattttttagatgg 300
|||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||
Sbjct: 441 aaattaaaatctgcagaaaaaagacgaatagggaccttaccccaacaattttttaaatgg 500
Query: 301 atgtatacatgcattttaaacacctctgcttgcagaagtcacaaactgtaaaagaacaaa 360
||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 501 atgtatacatgcattctaaacacttctgcttgcagaagtcacaaactgtaaaagaacata 560
Query: 361 ctttttactaggaacaaagtgatatctgatgcatttattttgtg 404
||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 561 ctttttactaggaacaaagagatatctgatgcatctattttgtg 604
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
