Query= MSMg01no353_j23.b1 MSMg01no353_j23.b1 CHROMAT_FILE:
MSMg01no353_j23.b1 PHD_FILE: MSMg01no353_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:33 2005
(510 letters)
>mm_chr3_3483931_3484840
Length = 910
Score = 835 bits (432), Expect = 0.0
Identities = 438/440 (99%)
Strand = Plus / Minus
Query: 5 gaattctctcacattactagctcattcctaaaatctgagaaggatgatgctgaatagaca 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaattctctcacatcactagctcattcctaaaatctgagaaggatgatgctgaatagaca 381
Query: 65 ggaaagtagtcttcaagaaagaaagataagtgttaaagaaaatatggtacaagcccttgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggaaagtagtcttcaagaaagaaagataagtgttaaagaaaatatggtacaagcccttgg 321
Query: 125 gatatgtgaacctgaatttttcatttcccactcacagacaacacttacaatgatactaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gatatgtgaacctgaatttttcatttcccactcacagacaacacttacaatgatactaaa 261
Query: 185 gacaaaactattacatctaacatcaaaggaatctagaactgtgtatgatggctagtttgt 244
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 260 gacaaaactattacatctaacatcgaaggaatctagaactgtgtatgatggctagtttgt 201
Query: 245 tgttgttgttgttgatgttgttgtggttgttttcaagacagggtttctctgagtagcctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tgttgttgttgttgatgttgttgtggttgttttcaagacagggtttctctgagtagcctt 141
Query: 305 ggctgtcttgaaaatcactctgtagaccaggctggcctcgaacacagatgtctgcctgcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 ggctgtcttgaaaatcactctgtagaccaggctggcctcgaacacagatgtctgcctgcc 81
Query: 365 tctgcctcccaagtgctgagattaaatgtgtgggccaccacgtccggtccttgatggcta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 tctgcctcccaagtgctgagattaaatgtgtgggccaccacgtccggtccttgatggcta 21
Query: 425 gttttatatcaacttaaaca 444
||||||||||||||||||||
Sbjct: 20 gttttatatcaacttaaaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 910
Length adjustment: 10
Effective length of query: 500
Effective length of database: 900
Effective search space: 450000
Effective search space used: 450000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_j23.g1 MSMg01no353_j23.g1 CHROMAT_FILE:
MSMg01no353_j23.g1 PHD_FILE: MSMg01no353_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:33 2005
(407 letters)
>mm_chr3_3310791_3311597
Length = 807
Score = 779 bits (403), Expect = 0.0
Identities = 406/407 (99%)
Strand = Plus / Plus
Query: 1 atcctgccctgtgccactttcaccacaagatggtgataatgtgttttgttgagtaagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcctgccctgtgccactttcaccacaagatggtgataatgtgttttgttgagtaagaaa 260
Query: 61 caagtttgtcttcttagaagcacactaattttgctttaaataggaagcacagaaaatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caagtttgtcttcttagaagcacactaattttgctttaaataggaagcacagaaaatcca 320
Query: 121 cttttaaaactcaaaagttttgtgaaaaagctgtggctgtctaagatgccaaataaacgt 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 cttttaaaactcaaaagttttgtgtaaaagctgtggctgtctaagatgccaaataaacgt 380
Query: 181 catattttgtcacatccttaaagaattcagttatacaatggttacaaacacatggaaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catattttgtcacatccttaaagaattcagttatacaatggttacaaacacatggaaagt 440
Query: 241 aagtaactcaactgaattaaaaacggatcaagactgaagaaagaaactcaaaggagagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagtaactcaactgaattaaaaacggatcaagactgaagaaagaaactcaaaggagagaa 500
Query: 301 ataattacaatcatctccaagagaaataggtgacagtaaggaatcataaaacacagggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataattacaatcatctccaagagaaataggtgacagtaaggaatcataaaacacagggct 560
Query: 361 gaaatcaataaaacagacacatagagaagactatgtcaaaagacaca 407
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaatcaataaaacagacacatagagaagactatgtcaaaagacaca 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
