Query= MSMg01no353_m17.b1 MSMg01no353_m17.b1 CHROMAT_FILE:
MSMg01no353_m17.b1 PHD_FILE: MSMg01no353_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:46 2005
(486 letters)
>mm_chr3_63536743_63537628
Length = 886
Score = 919 bits (475), Expect = 0.0
Identities = 483/486 (99%)
Strand = Plus / Plus
Query: 1 gttgggcttttcagcttgtagaagaggctgttctgttgtttttacccagactaagacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttgggcttttcagcttgtagaagaggctgttctgttgtttttacccagactaagacatt 260
Query: 61 ttattttagtggcccctgggaacagcttgctttcctcagaggacagggagaaagctgttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttattttagtggcccctgggaacagcttgctttcctcagaggacagggagaaagctgttc 320
Query: 121 ttagcagttgccggctggttccttcacacccaacccttctttcacagaacaacaatgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagcagttgccggctggttccttcacacccaacccttctttcacagaacaacaatgcag 380
Query: 181 cttataccacggtcccaggactatgccattttcaagtcactaatacatttcagaaatcac 240
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 381 cttataccacggtcccaggactatgccattctcaagtcactaatacatgtcagaaatcac 440
Query: 241 agaccttggacagggaaaactctcataatgagatgggaagagatctgagttacaatatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaccttggacagggaaaactctcataatgagatgggaagagatctgagttacaatatta 500
Query: 301 tattcatgcccaactatccatgggagactggcgctggaatacttctcagacaccaaatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattcatgcccaactatccatgggagactggcgctggaatacttctcagacaccaaatcc 560
Query: 361 caaagctgtttaagtccttcctgcaacacaatttgatatctgcacaccacggtgtgcatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaagctgtttaagtccttcctgcaacacaatttgatatctgcacaccacggtgtgcatc 620
Query: 421 ctcctgttcacttcaaatcacttctaggctacttatcatgcataatataacatanatatt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 ctcctgttcacttcaaatcacttctaggctacttatcatgcataatataacataaatatt 680
Query: 481 atgcaa 486
||||||
Sbjct: 681 atgcaa 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_m17.g1 MSMg01no353_m17.g1 CHROMAT_FILE:
MSMg01no353_m17.g1 PHD_FILE: MSMg01no353_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:46 2005
(451 letters)
>mm_chr3_63681907_63682757
Length = 851
Score = 835 bits (432), Expect = 0.0
Identities = 451/466 (96%), Gaps = 15/466 (3%)
Strand = Plus / Minus
Query: 1 tttatgactgtccatgaactagctagttatttctttccaaaaggagatcaggtgcgtagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tttatgactgtccatgaactagctagttatttctttccaaaaggagatcaggtgcgtagg 781
Query: 61 cactgcattttaatttctgcctagatccttgtgtcctgttcctgtttttagcaatttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 cactgcattttaatttctgcctagatccttgtgtcctgttcctgtttttagcaatttgaa 721
Query: 121 ggcatgagccagtgag-------------gttt--ttttgttttgttttgttttgttttg 165
|||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 720 ggcatgagccagtgaggttgttttgttttgttttgttttgttttgttttgttttgttttg 661
Query: 166 ttttgttttacgatgaggcctggctagtaaccttgcctttgtagagcacacttactcaaa 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ttttgttttacgatgaggcctggctagtaaccttgcctttgtagagcacacttactcaaa 601
Query: 226 tttcattttaaaactgcatttcatcatctcatacggaaagaactcacacttcgcacgttt 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tttcattttaaaactgcatttcatcatctcatacggaaagaactcacacttcgcacgttt 541
Query: 286 ccattccattccatgtactctagagacacttggctggaggcataaatatacatttaaaaa 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ccattccattccatgtactctagagacacttggctggaggcataaatatacatttaaaaa 481
Query: 346 acaagtaacattgtatgtaaccagttccttccctctcttcttggtctgtggtgagatggg 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 acaagtaacattgtatgtaaccagttccttccctctcttcttggtctgtggtgagatggg 421
Query: 406 gacaacaggagaggttggaaaagtcgatgtgttgagtgtcatcagt 451
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gacaacaggagaggttggaaaagtcgatgtgttgagtgtcatcagt 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 7
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
