Query= MSMg01no354_c01.b1 MSMg01no354_c01.b1 CHROMAT_FILE:
MSMg01no354_c01.b1 PHD_FILE: MSMg01no354_c01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:11 2005
(524 letters)
>mm_chr3_90243583_90244506
Length = 924
Score = 982 bits (508), Expect = 0.0
Identities = 520/524 (99%)
Strand = Plus / Minus
Query: 1 gctggccttgaactctcgggagatcagcctgcctctgcctctgcttctaaagtgctggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 gctggccttgaactctcgggagatcagcctgcctctgcctctgcttctaaagtgctggga 748
Query: 61 ttgaaggtatgtaccactacacctcatgtttgcttttatctttttaaagaccataatagt 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 747 ttgaaggtatgtaccactacacctcatgtttgtttttatctttttaaagaccataatggt 688
Query: 121 ttttttttgcatacattataatatctgctaaggttatacttgttggggtggtccaaaatg 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 687 ttttttttgcatacattataatatctgctaatgttatacttgttggggtggtccaaaatg 628
Query: 181 gggtcacctaagacaccaagatggatgacccatgtgggaaccagccccttccgggaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gggtcacctaagacaccaagatggatgacccatgtgggaaccagccccttccgggaaatg 568
Query: 241 gaacattctgtacttcttagaatctgctgagcccttgtctcagaagaacagctggaccat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gaacattctgtacttcttagaatctgctgagcccttgtctcagaagaacagctggaccat 508
Query: 301 aacctcctgctatactaatggcccgtcccatccccaacccctcgtaaaatttggtttatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aacctcctgctatactaatggcccgtcccatccccaacccctcgtaaaatttggtttatt 448
Query: 361 gcagtccctttggcctgcctcagttccttttccttactgctctcccaacagttttccgcc 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gcagtcccttttgcctgcctcagttccttttccttactgctctcccaacagttttccgcc 388
Query: 421 agactaaaaccaccctataaaacccaagctctcctttgtgaccaggctgttctccctttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agactaaaaccaccctataaaacccaagctctcctttgtgaccaggctgttctccctttt 328
Query: 481 cttgggcccagcagttcctactctgaatgaagctttgcctttca 524
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cttgggcccagcagttcctactctgaatgaagctttgcctttca 284
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no354_c01.g1 MSMg01no354_c01.g1 CHROMAT_FILE:
MSMg01no354_c01.g1 PHD_FILE: MSMg01no354_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:12 2005
(318 letters)
>mm_chr3_90075327_90076049
Length = 723
Score = 586 bits (303), Expect = e-172
Identities = 316/323 (97%), Gaps = 5/323 (1%)
Strand = Plus / Plus
Query: 1 ctgctgacagactatgaggctgtgtgtggccgcaggactcgcctggaacgggaagtccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgctgacagactatgaggctgtgtgtggccgcaggactcgcctggaacgggaagtccag 260
Query: 61 ggagccttcctgcgcttcatggcctgtctgctcaaaggttaccggaacttcctccgtcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagccttcctgcgcttcatggcctgtctgctcaaaggttaccggaacttcctccgtcct 320
Query: 121 ctcacgcaggccccctctgaggggtctcgagatgttgacaaccttttttaccttcagggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcacgcaggccccctctgaggggtctcgagatgttgacaaccttttttaccttcagggt 380
Query: 181 aaataaagaggctctgttttggtttgcaaaaggatcagagggagggtgtggggggg---- 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaataaagaggctctgttttggtttgcaaaaggatcagagggagggtgtggggggggggg 440
Query: 237 -tgcagggcttcatgtgaaggctgggaggagtagattgctccttcctcctccacaactct 295
||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgcagggctccatgggaaggctgggaggagtagattgctccttcctcctccacaactct 500
Query: 296 ggttttggagggaataagggtat 318
|||||||||||||||||||||||
Sbjct: 501 ggttttggagggaataagggtat 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 723
Length adjustment: 9
Effective length of query: 309
Effective length of database: 714
Effective search space: 220626
Effective search space used: 220626
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
