NNNTTTTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCACTTACTTACACCATGCTGAACTCAACGAGATCTGCCT
GCCTTTGCCTACTGAATTAGATGTAAAGTACGAATCCGTATCTTAGCACA
TTAATGTTTAATGTTCAAAAGAGGAGTCTCCTACACCTGAACACTGAACC
ATAAAAAGGAATGGACAGAGAAGTATCAGAGACAATCGGAAGGGGGCTTG
TGTGTGTGCCCTTGTAGTAACGGGCACACATGCCAGGATCTCAAAGAGGG
AACACAATGGTGTCATCAAACCTAGAAGCAGGAGGAGCAGGACAACAGAA
GGTGTTCGATTTATCAAGGATGCCCCCATCCAGAGTGTCCACCCATCCTG
TGATACTACCATGCTTCCTCTTGACCTAAAGTGATATCATAACGTATATT
TGTTTTTTTTTTTTGTTTGTTTGTTTTAGGAAAATGGATTTGAACGAGAC
TAGCATAATACCAATTAGGATACAAAACCTGTTACATCACAAACGTAGTT
ACTTTTCAAGTCTCAATCAGGCTGAGTGTGCAGCTCGTGCACAGGCCAGG
TCCTTAGTCTAAGCTCAGCGCTTCATGGTGAGAAGGCTGAAGTGACTGGT
CATTTCCCAAAAACTGTTTTTGGCTGTTCACTCAATTAATGCTATTACGT
ATGCTTCTGACTTGGTAAATAAATCCCCCCAATTTTCATGTTACTCCACA
ACTTGGAT

NNCCCCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATTGTGGAATCCATCTCTAA
GTTTAGGTGAACAACTGATGGTAGACATGTGATTGGGGGTGTGGCATGTC
TCTACATGGAGGTAATGAGAGGTCACTGCCTGAGTCTGTGAAAGTGAAGT
CTGGATTGAATTGAAGGCCGCACAATGTTGGAGATACAAGAGTCATGGGA
TATTTGCCAAGGAGAGAAGCACACAGGACATGGAACCAGTACAAGAGAGA
GTTGTATATTGCAGACAGAAAAGCCAGTAGGGCGGAGCTATCTAAATTTT
TGATATCAGACATGTAGCTACAAGACCTTGTCTTACTGTGATTTGGTCTC
ACTTTGGTTCAGTGTTTCCACCTCCCTTTTGGAATGGTAATGTGTATTCT
GTGCCATTGCATGTTGGATGTGTGTAATTCACTATCTGATTTAAAGGAGT
TACAATTCAGAAATAGCCTTGAGACTCAGAAGAGATTTTGACTTGGGATT
TTTAAACAGGGTCAAGACAGAAAGACTTTAGACTACTGATTAAATGCATT
GTGTGTTTTGGTGTAGCCATAAACATATGGGAAAATAGTCTGGTGATTTT
AATGAAAAAAACCCCCCCCCCCTGGACTAATGTTTGAAAGCCTTGCTCCC
CGTCTTGGAAAGGAAAAAAAAAAATTGCTCTTTTTGATAATATTTTTGTA
CCCTCCCCCCG

Query= MSMg01no354_c07.b1 MSMg01no354_c07.b1 CHROMAT_FILE:
MSMg01no354_c07.b1 PHD_FILE: MSMg01no354_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:13 2005
         (519 letters)



>mm_chr3_32490519_32491437
          Length = 919

 Score =  917 bits (474), Expect = 0.0
 Identities = 506/518 (97%), Gaps = 4/518 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcacttacttacaccatgctgaactcaacgagatctgcctgcctttgcctactga 63
           ||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 204 ggaattcacttacgtagaccatgctgaactcaacaagatctgcctgcctttgcctactaa 263

                                                                       
Query: 64  attagatgtaaagtacgaatccgtatcttagcacattaatgtttaatgttcaaaagagga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 attagatgtaaagtacgaatccgtatcttagcacattaatgtttaatgttcaaaagagga 323

                                                                       
Query: 124 gtctcctacacctgaacactgaaccataaaaaggaatggacagagaagtatcagagacaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtctcctacacctgaacactgaaccataaaaaggaatggacagagaagtatcagagacaa 383

                                                                       
Query: 184 tcggaagggggcttgtgtgtgtgcccttgtagtaacgggcacacatgccaggatctcaaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcggaagggggcttgtgtgtgtgcccttgtagtaacgggcacacatgccaggatctcaaa 443

                                                                       
Query: 244 gagggaacacaatggtgtcatcaaacctagaagcaggaggagcaggacaacagaaggtgt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gagggaacacaatggtgtcatcaaacctagaagcaggaggagcaggacaacagaaggtgt 503

                                                                       
Query: 304 tcgatttatcaaggatgcccccatccagagtgtccacccatcctgtgatactaccatgct 363
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttgatttatcaaggatgcccccatccagagtgtccacccatcctgtgatactaccatgct 563

                                                                       
Query: 364 tcctcttgacctaaagtgatatcataacgtatatttgtttttttttt--ttgtttgtttg 421
           ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||
Sbjct: 564 tcctcttgacctaaagtgatatcataaagtatatttgttttttttttgtttgtttgtttg 623

                                                                       
Query: 422 ttttaggaaaatggatttgaacgagactagcataataccaattaggatacaaaacctgtt 481
           ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 624 ttttaggaaaatggatttgaatgagactagcgtaataccaattaggatacaaaacctgtt 683

                                                 
Query: 482 acatcacaaacgtagttacttttcaagtctcaatcagg 519
           ||||||||  ||||||||||||||||||||||||||||
Sbjct: 684 acatcaca--cgtagttacttttcaagtctcaatcagg 719


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space:   462681
Effective search space used:   462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)