Query= MSMg01no354_m22.b1 MSMg01no354_m22.b1 CHROMAT_FILE:
MSMg01no354_m22.b1 PHD_FILE: MSMg01no354_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:04 2005
(443 letters)
>mm_chr3_47953198_47954040
Length = 843
Score = 841 bits (435), Expect = 0.0
Identities = 438/439 (99%)
Strand = Plus / Plus
Query: 5 gaattccactaccctctcaaggatctcacatacaccttttcaggctggattagtttcttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccactaccctctcaaggatctcacatacaccttttcaggctggattagtttcttt 264
Query: 65 caaaaatagtacattctttgctttgttattccatgtattataatatactctctttactct 124
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaaaatattacattctttgctttgttattccatgtattataatatactctctttactct 324
Query: 125 cccttaatatctattgttctcctcttatgaattatatatatatatatgtatatatatata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cccttaatatctattgttctcctcttatgaattatatatatatatatgtatatatatata 384
Query: 185 catatatataaatatacacaaacactcatgttcatacgcatatgtaatacatacatgcat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catatatataaatatacacaaacactcatgttcatacgcatatgtaatacatacatgcat 444
Query: 245 gcatacatacatacatacatacatacatacatacatacatacatgtaaaggcacacatag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcatacatacatacatacatacatacatacatacatacatacatgtaaaggcacacatag 504
Query: 305 aagtacaaatctatgatccacatataagagaatatttagagtttatgttctccactttga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagtacaaatctatgatccacatataagagaatatttagagtttatgttctccactttga 564
Query: 365 cttattttatttatcacaatgattttctgttctatcagttttcctaaaaatgtctttatt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttattttatttatcacaatgattttctgttctatcagttttcctaaaaatgtctttatt 624
Query: 425 acatgtagtttccaagtaa 443
|||||||||||||||||||
Sbjct: 625 acatgtagtttccaagtaa 643
Score = 70.3 bits (36), Expect = 2e-16
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 157 tatatatatatatatgtatatatatatacatatatataaatata 200
||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 400 tatatttatatatatgtatatatatatacatatatatatatata 357
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 2
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no354_m22.g1 MSMg01no354_m22.g1 CHROMAT_FILE:
MSMg01no354_m22.g1 PHD_FILE: MSMg01no354_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:04 2005
(426 letters)
>mm_chr3_48132951_48133776
Length = 826
Score = 824 bits (426), Expect = 0.0
Identities = 426/426 (100%)
Strand = Plus / Minus
Query: 1 agaattgtagccattcaaaggccaaaacaatttagaaattgtaaaagatgtcataagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 agaattgtagccattcaaaggccaaaacaatttagaaattgtaaaagatgtcataagcag 567
Query: 61 gatatatctcctcctggagacgtagctgcatgatgtctgaatgtcagtgtcctctgggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gatatatctcctcctggagacgtagctgcatgatgtctgaatgtcagtgtcctctgggtt 507
Query: 121 tttattcttgatgttaggaaaaggagagcccgtacttaatgaacaaaaccatgtacaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tttattcttgatgttaggaaaaggagagcccgtacttaatgaacaaaaccatgtacaata 447
Query: 181 atgagcagcaatgtagactggtcacatttcatatatcacccatttctcttttttgtcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 atgagcagcaatgtagactggtcacatttcatatatcacccatttctcttttttgtcctt 387
Query: 241 gggaaaggacaattaagttagagctaatatttcagtatcactgagtatttttgtgtgaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gggaaaggacaattaagttagagctaatatttcagtatcactgagtatttttgtgtgaac 327
Query: 301 attcttctacaaattaaactggaaatgtcaatgacccacacactctcagaaatatctata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 attcttctacaaattaaactggaaatgtcaatgacccacacactctcagaaatatctata 267
Query: 361 tggtagctacttgacttttaatgcattcttttctcccattctgtatgcttgaatgtgaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tggtagctacttgacttttaatgcattcttttctcccattctgtatgcttgaatgtgaac 207
Query: 421 tctaca 426
||||||
Sbjct: 206 tctaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
