Query= MSMg01no356_d20.b1 MSMg01no356_d20.b1 CHROMAT_FILE:
MSMg01no356_d20.b1 PHD_FILE: MSMg01no356_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:54 2005
(574 letters)
>mm_chr3_82712340_82713313
Length = 974
Score = 1071 bits (554), Expect = 0.0
Identities = 566/570 (99%)
Strand = Plus / Plus
Query: 5 gaattcccacactttacccttcacctgtatatatggacacatgtgtgcacgcacattttt 64
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 205 gaattcccacactttacccttcacctgtatatatggacacatgtgtgcacacacattttt 264
Query: 65 ccaaccagttagcaagttgtagctttgatgtccacttgtccctcaaccctgctctgtata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccaaccagttagcaagttgtagctttgatgtccacttgtccctcaaccctgctctgtata 324
Query: 125 taatcacacttttataattatcaaagtcaaagaactatcagcagtattatcatgtaaact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taatcacacttttataattatcaaagtcaaagaactatcagcagtattatcatgtaaact 384
Query: 185 tcaggcttcctcagaatttcctgattgttgtagtaatggccattacaggaaacaatctga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcaggcttcctcagaatttcctgattgttgtagtaatggccattacaggaaacaatctga 444
Query: 245 atggcgccttgcccatccattgttacatagctgatgtcctctgcctttgtcatggtattt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atggcgccttgcccatccattgttacatagctgatgtcctctgcctttgtcatggtattt 504
Query: 305 tctcctggagcaaaacaaaacttgatttttcaaacacacatcagtgtgggtttgatgttt 364
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctcccggagcaaaacaaaacttgatttttcaaacacacatcagtgtgggtttgatgttt 564
Query: 365 attcatgcagaccttcaggtagtactttttgtcaggaattccacaggagtgcttgcatgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attcatgcagaccttcaggtagtactttttgtcaggaattccacaggagtgcttgcatgt 624
Query: 425 ccttttgaatgtgggttagctgtagatattgatatttcctgacatccaagatctgagaaa 484
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 625 ccttttgaatgtgtgttagctgtagatgttgatatttcctgacatccaagatctgagaaa 684
Query: 485 atatcagtgccttggagtcaccaagacgggattggcactctcagtcagaccccggatgcc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atatcagtgccttggagtcaccaagacgggattggcactctcagtcagaccccggatgcc 744
Query: 545 tctctttaaggtttatacatgtgtccctga 574
||||||||||||||||||||||||||||||
Sbjct: 745 tctctttaaggtttatacatgtgtccctga 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_d20.g1 MSMg01no356_d20.g1 CHROMAT_FILE:
MSMg01no356_d20.g1 PHD_FILE: MSMg01no356_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:54 2005
(174 letters)
>mm_chr3_82740794_82741367
Length = 574
Score = 277 bits (143), Expect = 3e-79
Identities = 152/155 (98%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 1 ttggaggactgggagagcaagttggaagtgcttttctagggagatgacagatgaagcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttggaggactgggagagcaagttggaagtgcttttctagggagatgacagatgaagcagc 260
Query: 61 catcagtcattgattctcaagacacaaagagcctttgattccaggtcatccctgggggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 catcagtcattgattctcaagacacaaagagcctttgattccaggtcatccctgggggga 200
Query: 121 tatatatatatatatatatatatatatatatatat 155
||||||||||||||| | | |||||||||||||||
Sbjct: 199 tatatatatatatatttgt-tatatatatatatat 166
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 97
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
