XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
TGACATTCTTAGGCAAATGGAGAAACTAGAAAATATCCTGAGTGAGGTAA
CCCTATCACAAAAGAATATACATGAATTAACAATTCTATACTGAATGTCC
CCACTATAAATTAAGAATCATGCAGACAACACAAGACAGATGAAGGAGAA
CTATATCTATCAATCTATCAGAAATACAAAATAAAGTTGTTATGGCTTTG
ATCATAAAGATCTAGAAAGACCCAAATATTAAACATTGGTTTCAAAGTGT
AAGATTATTAGCAAGTGGAGAGACTTTGAAGGTGAAGCATAGTGGAAGAC
CATTGCTGGCATTCCATTGAAAGGATATTGCAAATCCAAGCCCTTCTACT
CTTTTAGTTCATTGCCATCTGCAATGTGAACAGATTATTATCTCACTGAA
GCTCTCCACCATGTCACCACAGTTTCTCAAAGAGAGGTAAACAGCCATAG
AAGTCTCTAGAACCATGAACTATCATGTTTTTCTTCCTTATGTTGTTTTT
CTCAGTTGGTGTGATCATCATGAACCAGAAAGTCTCTATTACTACTACTA
CTACTACTACTACTACTACTACTACTTATTATTATTATTATTATTATTAT
TATTATTATTATTATTAAATCTTTCTTTACAGTCCAGACTTTATCCCCTC
CCAGTCCATCCTTCAACTCTTCCACATCCCAAACCTTCTCCATTTTCC

GAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTGATGGGAATTGCATTGAATCTGTAGA
TTGCTTTTGGTAAGATGGCTATTTTTAAAGTTAGCCTACAAATCCATGAA
CATATGAGATCTTTCCATCTTCTGCTATCTTCTTTAGTTTCTTTCTTCAA
AGACTTGAAGTTCTTGCCATACAGTCCTTTCACTTGTTTGGTTAGAGTTA
CACAAAGATATTTTATATTCTTTGTGGCTATTGTGAGGGATATATTCCTA
ATTTCTTTCTCAGCCCATTTCTAATTTGTATATAGGAGGACTTTTAGTAT
TTTTTTTTAAATTATTTTGTGTCCAGCCACTTTGATCAAGCTGTTTATCA
GGTATAGGAGCTCCCTGATACAATTTTTGGAATCAATTATATATACTATC
ATGTCATCTGGAAATACTATTACTTTAACTTTCTCCAGTCCAATTTGTGT
CCCCTTGGTCTCCTTTAGCTGTCTCACTGCTTTAGTTAGAACTTCAACTA
CTTTGTTGAGTAAATATGGAGAGAGTGGACAGCCTTGGCTATTCTTTGAA
TTTACTGGGATTGCTTTAATTTCTCTCTATTTAACTTGGTAATAACTGGT
GGCTGTGCTGATATTGAACTTATTTGGGTCAAGGGGGAACCTTGGGGCCA
GGATCTCTCCACAAATTTATATTGAAGGGGGGGGGGA

Query= MSMg01no356_h11.b1 MSMg01no356_h11.b1 CHROMAT_FILE:
MSMg01no356_h11.b1 PHD_FILE: MSMg01no356_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:12 2005
         (641 letters)



>mm_chr3_45503983_45505023
          Length = 1041

 Score = 1189 bits (615), Expect = 0.0
 Identities = 633/639 (99%), Gaps = 3/639 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatgacattcttaggcaaatgga-gaaactagaaaatatcctgagtgaggtaacc 63
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 829 gaattcatgacattcttaggcaaatggatgaaactagaaaatatcctgagtgaggtaacc 770

                                                                       
Query: 64  ctatcacaaaagaatatacatgaattaacaattctatactgaatgtccccactataaatt 123
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 769 ctatcacaaaagaatatacatgaattaacaattctatactgaatgttcccactataaatt 710

                                                                       
Query: 124 aagaatcatgcagacaacacaagacagatgaaggagaactatatctatcaatctatcaga 183
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 709 aagaatcatgcagacaacacaagacacatgaaggagaactatatctatcaatctatcaga 650

                                                                       
Query: 184 aatacaaaataaagttgttatggctttgatcataaagatctagaaagacccaaatattaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 aatacaaaataaagttgttatggctttgatcataaagatctagaaagacccaaatattaa 590

                                                                       
Query: 244 acattggtttcaaagtgtaagattattagcaagtggagagactttgaaggtgaagcatag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 acattggtttcaaagtgtaagattattagcaagtggagagactttgaaggtgaagcatag 530

                                                                       
Query: 304 tggaagaccattgctggcattccattgaaaggatattgcaaatccaagcccttctactct 363
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tggaagaccattgttggcattccattgaaaggatattgcaaatccaagcccttctactct 470

                                                                       
Query: 364 tttagttcattgccatctgcaatgtgaacagattattatctcactgaagctctccaccat 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tttagttcattgccatctgcaatgtgaacagattattatctcactgaagctctccaccat 410

                                                                       
Query: 424 gtcaccacagtttctcaaagagaggtaaacagccatagaagtctctagaaccatgaacta 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gtcaccacagtttctcaaagagaggtaaacagccatagaagtctctagaaccatgaacta 350

                                                                       
Query: 484 tcatgtttttcttccttatgttgtttttctcagttggtgtgatcatcatgaaccagaaag 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tcatgtttttcttccttatgttgtttttctcagttggtgtgatcatcatgaaccagaaag 290

                                                                       
Query: 544 tctctattactactactactactactactactactactactactta-ttattattattat 602
           ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 289 tctctattactactactactactactactactactactactac-tacttattattattat 231

                                                  
Query: 603 tattattattattattattattattaaatctttctttac 641
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tattattattattattattattattaaatctttctttac 192


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 73
Number of extensions: 15
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space:   650561
Effective search space used:   650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)