XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCCGTTG
TTTGATCAGTTACCACCTCTGATTAGGTTCAGTTTCCAATTTTTTTCTTT
CTCTTTTCTTTTTCTTTTCTTTTCCTTTTTCTCTTTCTTTTTTTAGTTGA
AATGCTTTTATTTTGATATTTGTAGGGCAGTAAGCTGATCTGGTCCCCTG
TTGAGAGCACAGGCTTTGAACCCTGGAGACCTGGCTGGTTACTTATAGCC
CTCAAGGAATGGCTGGTGTTCAGCCACACCCCTTGGGACCCTGATTTCTG
TTGCAGCTACAGCCACCCACAGCCCCCCTTTGAGGAACACACAAAGAGGT
GTGTGTCCATCAGTCAAGTAGGTCAATGCCCCAAGCTCCTTGTATTCTGT
CTGGACTCCACCCCCACAGTTACCTGGCAACAGCCAGGTATGCTCCTCCC
CATAGTTATCTGACAACAGCCAGGTAGGCCCAGACTACTATAAAAGGGGC
TGTTTGCCCCCTCCTCCCTCTCTCACTCTCTTGCTCTTACTCTCTTACTC
TTGCTTCTCACTCCCTTGCTCTCCCAGTTTCACCACATTCCCTTCCCCAC
CCCCACCTGCCATGGNCATGGCTGGCCTCTACTTCCTACTTTCTCCCTCT
CTTGGCTTTCTACAATAAACACCTTTAAACCATGGACTTTCTCTTCTCTT
CAGAATCTCCATGATGGAGCAATGCAGCAAGTCTTCCTCTAATGAACTGT
GTGTCTAAC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXAACACATATATCACCCTATAAAATCATTTAATAATA
GTTATTTCATTAAACATTTCCTCTTGTTGAGTTAAAAATGTTGTTATATG
TACACCAATATTAACTCGTGTGGTAATTGCATATTTTCACAGATAGAAAT
AATACAAAGTTATTTTTATCACAGAAATAGCTCATAAATATTGTACATGT
ACATTTTATGCATACAGGCACATACAAAAATGAATAACATATGTGTATAT
GAGTACACATACAACATATGCAGTGCTGGGGTTGAATTCAAGATTTCGGT
GCCTCATACATAAAAGTTAAATGACCAGCAATTGACACCCCCAGTGTCTG
AAAACTGATAATTTTAACTACTTACACTCTCTATATAAATCTTTGTCAAA
ATCCATTCCTAAAATTTCTGCAGGCAATTCAATTTAAAACATAACTGAAT
CTTATTAATTTCTGTAGTATGTACAGATAAATGATATGCAAAATGATAGC
ATGGCACTGAATGCATAGAAATGCCATTAAGTACTGTTATGCAAAACACA
AAATGACTTATAAAATATTGGTCAAATTATATCTAGAAGCCAGGACTTCC
TTCTCTGGGGTATATTCTACTCTCATGTAGGTCCTCATATTCTTCTATAT
TTCCTTTAGAAAAAAAATTTTACATTTACCTTATAATTAACATTTAATTT
GAAATGGAGAGTTTATACTCATTTTTTA

Query= MSMg01no356_h19.g1 MSMg01no356_h19.g1 CHROMAT_FILE:
MSMg01no356_h19.g1 PHD_FILE: MSMg01no356_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:13 2005
         (546 letters)



>mm_chr3_73719590_73720535
          Length = 946

 Score =  893 bits (462), Expect = 0.0
 Identities = 525/546 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacacatatatcaccctataaaatcatttaataatagttatttcattaaacatttcctct 60
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 aacacatatatcaccctataaaatcatttaataatagctatttcattaaacatttcctct 260

                                                                       
Query: 61  tgttgagttaaaaatgttgttatatgtacaccaatattaactcgtgtggtaattgcatat 120
           |||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 261 tgttgagttaaaaatgttgttatatgcacaccaacattaactcatgtggtaattgcatat 320

                                                                       
Query: 121 tttcacagatagaaataatacaaagttatttttatcacagaaatagctcataaatattgt 180
           |||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| 
Sbjct: 321 tttcacagatagaaataatagaaaggtatttttatcacagaaatagctcataaaaattgc 380

                                                                       
Query: 181 acatgtacattttatgcatacaggcacatacaaaaatgaataacatatgtgtatatgagt 240
           ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 acatgtacattttatgcgtacaggcacacacaaaaatgaataacatatgtgtatatgagt 440

                                                                       
Query: 241 acacatacaacatatgcagtgctggggttgaattcaagatttcggtgcctcatacataaa 300
           ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acacacacaacatatgcggtgctggggttgaattcaagatttcggtgcctcatacataaa 500

                                                                       
Query: 301 agttaaatgaccagcaattgacacccccagtgtctgaaaactgataattttaactactta 360
           |||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 501 agttaaatgaccagcaatcgacacctccagtgtctgagaactgataattttaactactta 560

                                                                       
Query: 361 cactctctatataaatctttgtcaaaatccattcctaaaatttctgcaggcaattcaatt 420
           ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 561 cactctctatataaatctttgccaaaatccattcctaaaatttctgcaggcaattccatt 620

                                                                       
Query: 421 taaaacataactgaatcttattaatttctgtagtatgtacagataaatgatatgcaaaat 480
           |||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 621 taaaacatagttgaatcttattaatttctgtagtatatacagataaatgatatgcaaaat 680

                                                                       
Query: 481 gatagcatggcactgaatgcatagaaatgccattaagtactgttatgcaaaacacaaaat 540
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gatagcatggcactgaacgcatagaaatgccattaagtactgttatgcaaaacacaaaat 740

                 
Query: 541 gactta 546
           ||||||
Sbjct: 741 gactta 746


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space:   501696
Effective search space used:   501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)