Query= MSMg01no356_l21.b1 MSMg01no356_l21.b1 CHROMAT_FILE:
MSMg01no356_l21.b1 PHD_FILE: MSMg01no356_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:33 2005
(511 letters)
>mm_chr3_84817939_84818849
Length = 911
Score = 806 bits (417), Expect = 0.0
Identities = 426/429 (99%)
Strand = Plus / Minus
Query: 5 gaattcccagatcctctgagtcaggtctttgcacttctgcctcagaagctgttttagctt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gaattcccagatccactgagtcaggtctttgcacttctgcctcagaagctgttttagctt 370
Query: 65 tttggaggtagttgaagctgtttacctcaacgttggtactgaaaaataagaactgactct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tttggaggtagttgaagctgtttacctcaacgttggtactgaaaaataagaactgactct 310
Query: 125 gggattgatggttcaatttaactggcagcttgatgcattttagaatcgcataggggagag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gggattgatggttcaatttaactggcagcttgatgcattttagaatcgcataggggagag 250
Query: 185 tttcagtgagggactgtccagatccagttggcctgtagtcttcatggattgtattgatta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttcagtgagggactgtccagatccagttggcctgtagtcttcatggattgtattgatta 190
Query: 245 ccttaactgaagcgagatagcccagcctaaagccgtgggcagttccattccctagaagat 304
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 189 ccttatctgaagcgagatagcccagcctaaagccgtgggcagttccataccctagaagat 130
Query: 305 gagctgagtgtgcgcatgcatgcgctctctgccgctgacgcgatgtgtctctgtttccag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gagctgagtgtgcgcatgcatgcgctctctgccgctgacgcgatgtgtctctgtttccag 70
Query: 365 ctcctgacttgatttcctcacagtgatgcactgtagcctagaatggagggtagaattatt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ctcctgacttgatttcctcacagtgatgcactgtagcctagaatggagggtagaattatt 10
Query: 425 cccttttac 433
|||||||||
Sbjct: 9 cccttttac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_l21.g1 MSMg01no356_l21.g1 CHROMAT_FILE:
MSMg01no356_l21.g1 PHD_FILE: MSMg01no356_l21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:33 2005
(422 letters)
>mm_chr3_84575145_84575967
Length = 823
Score = 694 bits (359), Expect = 0.0
Identities = 411/445 (92%), Gaps = 28/445 (6%)
Strand = Plus / Plus
Query: 6 aatgggaatgtgggcctgattccttcttaagagtgccgggcactcttaagccgggcagtg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 aatgggaatgtgggcctgattccttcttaagagtgccgggcactcttaagccgggcagtg 238
Query: 66 gtggtgcatgcctttaatcctagcacttgggaggcagaggcaggaagatttctgagttcg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gtggtgcatgcctttaatcctagcacttgggaggcagaggcaggaagatttctgagttcg 298
Query: 126 aggccagcctggtctacaaagtgagttccaggacagccagggctacacagaccaaacatc 185
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 299 aggccagcctagtctacaaagtgagttccaggacagccagggttacacagaccaaacatc 358
Query: 186 tctatatcatgctactgggtggtggggacttgcttagagcaagttaggtcttcctcctcc 245
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tctatatcgtgctactgggtggtggggacttgcttagagcaagttaggtcttcctcctcc 418
Query: 246 tcctcctc-tcctcct--------------------------tctgtcagcatcctggtt 278
|||||||| ||||||| ||||||||||||||||||
Sbjct: 419 tcctcctcctcctcctcttcctcctcttcctcctcccctccttctgtcagcatcctggtt 478
Query: 279 gaaggaggtgaacagtctcctcaaccaatggccttattcttattcttggtcccatgccac 338
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 479 gaaggaggtgaacagtctactcaaccattggccttattcttattcttggtcccatgccac 538
Query: 339 cagaggcccaaagcaacacagtcatgtgaccagtgactgaattttttt-aaaaccgtgaa 397
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 539 cagaggcccaaagcaacacagtcatgtgaccactgactgaattttttttaaaaccgtgaa 598
Query: 398 ccaagtaaacttttctttttaaaag 422
|||||||||||||||||||||||||
Sbjct: 599 ccaagtaaacttttctttttaaaag 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 823
Length adjustment: 9
Effective length of query: 413
Effective length of database: 814
Effective search space: 336182
Effective search space used: 336182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
