XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TCACATGAAGAAACCAAATGGCTGAGAAACGCCTGAAAAAAATGTTCAGC
CTCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGGTTCCATC
TCACACCAGTCAGAATGGTTAATATCAAAAATTCAGGTGACAGCAGATGC
TGGTGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTG
CAAGCTTGTACAACCACTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAAT
TGGACATAGTACTACCAGAGGATCCCACAATACCTCTCCTGGGCATATAT
CCAGAAGATGTTCCAACTAGTAAGAAAGAAACATGTTCCACTATGTTCAT
AGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGAAGCCCCT
CAACAGAAAAATGGATACAAAAAAATGTGGTACATTTACACAATGGAGTA
CTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAAT
GGTTGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAAT
AATTCAAATGATATGTACTCCCTGATTATTGGATATTAGCCCAGAAACTT
ATAATATCCAAGATATAATGTAACAATTTGCCAAAAACATGGTACTCTAG
AAATAATGAAGACCCAAGTGTGGTACCCTGCCCCTTCTTAAAATTGGTAA
CACAACA

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAATAGAGGAGTGATTAATTATGAG
TTGGAATCATAAATGGAGAATTTCAAAGAGATTGGTATAAAATCACTTCT
GGGAAATGAATTCATATATTAAATAGTAAATAGTAGAAAATAATAATCCA
AAAAATTTTCCTTTGCATTGAGAAATATCTTTGCCTGTGTTCAGTCATGC
AATAAAATATTAGCCTCACAGAGACTCATGATTTAGAGTGCTTTTAGCCC
ATGCATTTCTCGTTTTCAGCTCATTCATTATATTTGAAGTTTGTATATGT
TTTTGAATATCATTCAGAGTGAATCCTAAAATGGTAATAATGATGATGCA
GGCAATAGATTCTCTATCTGTGATCATTACTTGATATTTCTCAAGGCAGC
CAGAGCATCATTCCTGGCATATTTAATGGTAGCTAAAATAAAATAGCAGA
ATCGGATCCTTATCTGATATCCTAGATTATCACACAACAGACGGTGGAAG
GAATAGGAGCAGTTGACTTGGCTGTCTTGTATCTAACTCGCAATTCAAGA
TGAAATTTAAAACTTTTCAAATTTCCACCATTTAAATCAAATGATTTTTC
CTAATATGGCCACTCCTCGCATTCCCATATTTGGTTGGGAAAACCCCCTT
AAATTCTTCTTGGGGACGATTTTCGGGGTTACCTGTAGATTTTTTCTCCA
CTCCCCTCTCATTTTTTTTTN

Query= MSMg01no356_n04.g1 MSMg01no356_n04.g1 CHROMAT_FILE:
MSMg01no356_n04.g1 PHD_FILE: MSMg01no356_n04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:40 2005
         (489 letters)



>mm_chr3_59022442_59023330
          Length = 889

 Score =  930 bits (481), Expect = 0.0
 Identities = 487/489 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatagaggagtgattaattatgagttggaatcataaatggagaatttcaaagagattggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagaggagtgattaattatgagttggaatcataaatggagaatttcaaagagattggt 260

                                                                       
Query: 61  ataaaatcacttctgggaaatgaattcatatattaaatagtaaatagtagaaaataataa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataaaatcacttctgggaaatgaattcatatattaaatagtaaatagtagaaaataataa 320

                                                                       
Query: 121 tccaaaaaattttcctttgcattgagaaatatctttgcctgtgttcagtcatgcaataaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccaaaaaattttcctttgcattgagaaatatctttgcctgtgttcagtcatgcaataaa 380

                                                                       
Query: 181 atattagcctcacagagactcatgatttagagtgcttttagcccatgcatttctcgtttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 atattagcctcacagagactcatgatttagagtgcttttagcccatgcatttctcatttt 440

                                                                       
Query: 241 cagctcattcattatatttgaagtttgtatatgtttttgaatatcattcagagtgaatcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagctcattcattatatttgaagtttgtatatgtttttgaatatcattcagagtgaatcc 500

                                                                       
Query: 301 taaaatggtaataatgatgatgcaggcaatagattctctatctgtgatcattacttgata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaaatggtaataatgatgatgcaggcaatagattctctatctgtgatcattacttgata 560

                                                                       
Query: 361 tttctcaaggcagccagagcatcattcctggcatatttaatggtagctaaaataaaatag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttctcaaggcagccagagcatcattcctggcatatttaatggtagctaaaataaaatag 620

                                                                       
Query: 421 cagaatcggatccttatctgatatcctagattatcacacaacagacggtggaaggaatag 480
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 621 cagaatcggatccttatctgatatcctagattatcacacaacagacgggggaaggaatag 680

                    
Query: 481 gagcagttg 489
           |||||||||
Sbjct: 681 gagcagttg 689


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space:   421041
Effective search space used:   421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)