Query= MSMg01no356_o07.b1 MSMg01no356_o07.b1 CHROMAT_FILE:
MSMg01no356_o07.b1 PHD_FILE: MSMg01no356_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:45 2005
(388 letters)
>mm_chr3_118872983_118873770
Length = 788
Score = 714 bits (369), Expect = 0.0
Identities = 381/385 (98%), Gaps = 2/385 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtatata-ttcttataaacccagtacatatccttagatttccaatattggaat 63
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtatatagtt-ttataaacccagtacatatccttagatttccaatattggaat 263
Query: 64 cctatttacaccttttaaaaagcaatatacatttatagcaaacaaatatccaactattgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctatttacaccttttaaaaagcaatatacatttatagcaaacaaatatccaactattgg 323
Query: 124 aattcaatatacagctctgaaatccaatatatatgcatagatacccaatataaatctata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aattcaatatacagctctgaaatccaatatatatgcatagatacccaatataaatctata 383
Query: 184 agcatagaatatacatttatataaatccagcatacacctatcagaatctagtatacacct 243
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agaatagaatatacatttatataaatccagcatacacctatcagaatctagtatacacct 443
Query: 244 actggaacccaatatatgcctataagaatccaatatacagccgggcagtggtgtcgcatg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 actggaacccaatatatgcctataagaatccaatatacagccgggcagtggtgtcgcatg 503
Query: 304 cctttaatcccagcactttggaggcagaggcaggtggatctctgagttcaaggacagcct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cctttaatcccagcactttggaggcagaggcaggtggatctctgagttcaaggacagcct 563
Query: 364 agtctacacagtgagttccaggaca 388
|||||||| ||||||||||||||||
Sbjct: 564 agtctacagagtgagttccaggaca 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_o07.g1 MSMg01no356_o07.g1 CHROMAT_FILE:
MSMg01no356_o07.g1 PHD_FILE: MSMg01no356_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:45 2005
(251 letters)
>mm_chr3_119030890_119031540
Length = 651
Score = 472 bits (244), Expect = e-138
Identities = 247/248 (99%)
Strand = Plus / Minus
Query: 1 tttctgcagctctgcacagcctcctgaggtctgccaggaaccctcttgctggtggcattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tttctgcagctctgcacagcctcctgaggtctgccaggaaccctcttgctggtggcattg 389
Query: 61 cccccttggagatggagaaggtagaggtggcaactactgctgttacaagccccgggtccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 388 cccccttggagatggagaaggtagaggtggcaactactgctgttacaagccccaggtccc 329
Query: 121 cacacgaggtcagcttccggcctctaataagctctcctccagctgttctggtgttttcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cacacgaggtcagcttccggcctctaataagctctcctccagctgttctggtgttttcag 269
Query: 181 taggtggggctgggagaccaaggtcagaaaagagctgtcatcagtgacatggtttttgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 taggtggggctgggagaccaaggtcagaaaagagctgtcatcagtgacatggtttttgcc 209
Query: 241 cactgctg 248
||||||||
Sbjct: 208 cactgctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
