TTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTT
CTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCT
ATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTCT
TTGTCTTATTGACGTTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATT
AGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTTCTGTTCT
GTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTT
TCTCCTCTATAAGTTTCAGGTCTCTGGTTTTATGTGAAGTTCTTTGATCC
ATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCACATT
CTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGCT
GTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGAC
CATATGTGTGTGGGTTCATTTCTGGGTCTTCAATTTATTCGATTGGTCCA
CTTGTCTGTCTCTATACCAGAACCATGCAGTTTTTACCACAATTGGTTCG
TAGTAAAGTTTTATTTCCGGCCTGCTGAATTCCCCCTAAGTTTCTTTTTT
CTCTGATAAAACATTTTCTTTCCCAAACTTTTTGTCTTTTCCA

NCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTAACATTTTTACCATGAAG
AAAATTTTTATCTCTAAAAGAAAATTAAAAAGTAATAAAATGCTTACTCA
GAATCCTTGTGAGTATCTAATAGCAAATTCCCATTAGTGTCTATTTATGC
ATAGCTAATCCCTTTAACTTTAAAAACTTACCTCTAACTTCTGATAAACA
CAACACAGACTGTGTTAAGTATTACATATATTTTTCATTTAAAATGTTTA
TCTAATATCAAACTATAAATTTAGATTGAAATAAAAATAAAAGCAACCAA
GTGGATGCAGCAGTAACTTTGTTTACTGTGTTTGGAGTTAAATGAAACAT
AGTTTAGTCTTTTGTGGAAAGTTACTATATTTATCTATAGGGTAAAGAAA
TTTGCACTGTTAGAGATCCTGCCACATATTTCTGCTGAATAACTAATTAA
AGATGTGGAGATTAGACCAGACAAGAATGGAAAGTTACTGTATTCATTAT
TCTCATACACCTCTTTGGTTTGAATTGATTTTCCACTAATCCAGGCTGCC
CAACAATGGATAAGAATGGACTCTCCCTTCTCGAAATTGTGCAAAAAATA
TGAAGACCTTGGCAATACCCGGGAGAAAAATGCCCGGCGAATCCCAAATT
TGGGGTTATCTCTAACACACCTTCGAAATTCCTTTTTCAAATAAATAACC
TCCCCCTG

Query= MSMg01no357_e10.g1 MSMg01no357_e10.g1 CHROMAT_FILE:
MSMg01no357_e10.g1 PHD_FILE: MSMg01no357_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:13 2005
         (427 letters)



>mm_chr3_12956440_12957266
          Length = 827

 Score =  787 bits (407), Expect = 0.0
 Identities = 422/427 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttaacatttttaccatgaagaaaatttttatctctaaaagaaaattaaaaagtaataaa 60
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 201 tttaacatttttaccatgaagaaaaattttatctctaaaagaaaattaaaaagaaataaa 260

                                                                       
Query: 61  atgcttactcagaatccttgtgagtatctaatagcaaattcccattagtgtctatttatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgcttactcagaatccttgtgagtatctaatagcaaattcccattagtgtctatttatg 320

                                                                       
Query: 121 catagctaatccctttaactttaaaaacttacctctaacttctgataaacacaacacaga 180
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 catagctaatccctttaactttaaaaacttacctctagcttctgataaacacaacacaga 380

                                                                       
Query: 181 ctgtgttaagtattacatatatttttcatttaaaatgtttatctaatatcaaactataaa 240
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtgttaagtattacatatacttttcatttaaaatgtttatctaatatcaaactataaa 440

                                                                       
Query: 241 tttagattgaaataaaaataaaagcaaccaagtggatgcagcagtaactttgtttactgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttagattgaaataaaaataaaagcaaccaagtggatgcagcagtaactttgtttactgt 500

                                                                       
Query: 301 gtttggagttaaatgaaacatagtttagtcttttgtggaaagttactatatttatctata 360
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 gtttggagttaaatgaaacatagtatagtcttttgtggaaagttactatatttatctata 560

                                                                       
Query: 361 gggtaaagaaatttgcactgttagagatcctgccacatatttctgctgaataactaatta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggtaaagaaatttgcactgttagagatcctgccacatatttctgctgaataactaatta 620

                  
Query: 421 aagatgt 427
           |||||||
Sbjct: 621 aagatgt 627


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space:   341924
Effective search space used:   341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)