ATTTGCGCCCCTATACAACTTCCTATTCCNAGAGGATCCGCGAAATTCAC
AGTGTTCACAGAAAGCAGTTAAAATGGNAAATTTGNNTAAATTTCCAGGA
TAAAGCATTCATTGTCTCATGACAGTGGGTGGATGAATACTCAAGATCTG
ATCTTACCCTAATTCTTTGATACAATTAANNNNNNGATCTAGGAGGAATT
ATTTGGCTGGGGAGGATGAGAATGTGAGAAAAAGGGATGGAGTGGGGNTC
TCTTTTTTTTNTCNNNNCAAACCTTGNNAATTTCTTAACTTTTTTATAAC
CCCCTAATTTCACANCCAAAATTTTTAACCGCCTTTTCCTGTTTTANTTT
TTAAAAAATTTCCCATGGCCCCCTTTTTTATTTAAGGCCTTTTCCCTTTA
TAAAAAAAAAAAGGTTCTCCTCAAATTTTAAAACTTAAAATTTTTTTTTT
TTTCCTTTTCCCCCCTCTTATTAAAAATTTTTTTTCTTTCCAATTTTCCC
CCCCTCTNTATTTTTTTTTTCCCTTTTTTTTCCCCNTTTTTACCCCTTTT
TTAATTTTTTTTTTTTTTTTCTNCCCCCCCCACCACTTTTTTTCCCCAAT
TTTTTTTCTTTCTTTTTTNCNNNNNNTTTTCCTTTNCTTCCCCTCCCCTT
TTCCCCCCTCCTTTTCTCTTTTTTTTTTTCCCTCTTCCCCTTTTCCCTTT
TCCTTTTTTTCCNTTTTTTCCCCTTTTTTTTTATTTTTTTTCTTTCTCTT
ACTTCTATAAATTAGATTTTTTTTTT

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTATTACTTAAGAAGTCATGGTTCT
TCATGGGACCTGATTACTCTTCGTCTAGGGTACAGCCTGACCATCGTGAA
GATTGTGGTCATGAGAAGGGGTGATTGTCTGTCAGCCAAGCTTTGCTGTC
ACTGGAACCAGAGTGTGTAAAGGTTCAGGACAAATACATCAATGCACCTC
CATAAGGTAGAAGGATAAGACAGGTAAAGTAAACCCATGATCCTTTAAGT
GAAGTTAAGCAGGAGCTAAACCAAAAGAAAGGAAACATACACAAAATTCA
AATGAAGATTCGAACTTTGACCCTGCTGTGACTTACTATGTAAGCCTGAG
TAAAGAGTCAATGCATTTTAACAAAAACAGTTTCTGGGTACCTATAAGAA
GGCAAGTAAGCATAGGAAACAGTTTAGTACCCTGGGAGTCCCATTGGTTT
GGGGTGATGCACGCCTCCTCTTCCTCTTCTTCCTCCTCCTCCTCATCCTC
CTTCATCTTCTTCATCTTCTTCTTCTTGGAAAAATGCTTTTGGTTCCTTA
ACTGCCCATACTGGACATACACATTTCTCTACAAACCAAACCCAAGAAAA
CCTCTGAAAACTTAGGCCCTCTCCCGATGGTTAACAATTAAAGGGGGTCT
CCCTGGCCCCGGTTAAAAAAAAACAACTTCTCTTTTCCTATTTCCCCTTT
TTATCGAG

Query= MSMg01no357_n06.g1 MSMg01no357_n06.g1 CHROMAT_FILE:
MSMg01no357_n06.g1 PHD_FILE: MSMg01no357_n06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:56 2005
         (521 letters)



>mm_chr3_119305320_119306240
          Length = 921

 Score =  884 bits (457), Expect = 0.0
 Identities = 509/533 (95%), Gaps = 12/533 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctattacttaagaagtcatggttcttcatgggacctgattactcttcgtctagggtacag 60
           ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 201 ctattacttaagaagtcatggttgttcatgggacctgactactcttcgtctagggtacag 260

                                                                       
Query: 61  cctgaccatcgtgaagattgtggtcatgagaaggggtgattgtctgtcagccaagctttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgaccatcgtgaagattgtggtcatgagaaggggtgattgtctgtcagccaagctttg 320

                                                                       
Query: 121 ctgtcactggaaccagagtgtgtaaaggttcaggacaaatacatcaatgcacctccataa 180
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctatcactggaaccagagtgtgtaaaggttcaggacaaatacatcaatgcacctccataa 380

                                                                       
Query: 181 ggtagaaggataagacaggtaaagtaaacccatgatcctttaagtgaagttaagcaggag 240
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 ggtagaaggataagacaggtaaagtaaacccatgatcctttaagtgacgttaagcaggag 440

                                                                       
Query: 241 ctaaaccaaaagaaaggaaacatacacaaaattcaaatgaagattcgaactttgaccctg 300
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 441 ctaaaccaaaagaaaggaaacatacacaaaattcagatgaagattcgaactttgaccccg 500

                                                                       
Query: 301 ctgtgacttactatgtaagcctgagtaaagagtcaatgcattttaacaaaaacagtttct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtgacttactatgtaagcctgagtaaagagtcaatgcattttaacaaaaacagtttct 560

                                                                       
Query: 361 gggtacctataagaaggcaagtaagcataggaaacagtttagtaccctgggagtcccatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggtacctataagaaggcaagtaagcataggaaacagtttagtaccctgggagtcccatt 620

                                                                       
Query: 421 ggtttggggtgatgcacgcctcctcttcctcttcttcctcctcctcctcatcctcct--t 478
           |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||  |
Sbjct: 621 ggtttggggtgatgcacgcctcctcttcctcttcctcctcctcctcctcctcctcctcct 680

                                                                
Query: 479 catcttc----------ttcatcttcttcttcttggaaaaatgcttttggttc 521
           | || ||          |||||||||||||||||| || ||||||||||||||
Sbjct: 681 cctcctcctcctcctccttcatcttcttcttcttgtaataatgcttttggttc 733


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space:   465521
Effective search space used:   465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)