Query= MSMg01no358_h23.b1 MSMg01no358_h23.b1 CHROMAT_FILE:
MSMg01no358_h23.b1 PHD_FILE: MSMg01no358_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:46 2005
(407 letters)
>mm_chr3_145260459_145261265
Length = 807
Score = 719 bits (372), Expect = 0.0
Identities = 399/408 (97%), Gaps = 1/408 (0%)
Strand = Plus / Minus
Query: 1 aatttttagtttgtatatcttaaaaatttattgttttaaggtttctgtttttaattagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 aatttttagtttgtatatcttaaaaatttattgttttaaggtttctgtttttaattagta 408
Query: 61 tccccttttattagttattaagaattgtgtacaattttgatcacatccatcccttcccac 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 407 tccccttttattagttattaagaattgtgtacaattttgatcacattcatcccttcccac 348
Query: 121 atgtcatccaggtcacgcttctcctctttatcttcctctaagaaaccatctagtccatat 180
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 347 atgtcatccagatcacgcttctcctctttatcttcctctaagaaaccatccagtccatat 288
Query: 181 actttaggatgtgtggccactaactgcagtgtgatcaacctagcagggtcgcacccttat 240
|||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 287 actttaggatgtgtggccactaactggagtgtgatcaacctagcagggtcgcgcccttac 228
Query: 241 agattaactctctctatactctcagcgagtggtggcacttagtgtctgcttcctctcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 agattaactctctctatactctcagcgagtggtggcacttagtgtctgcttcctctcctc 168
Query: 301 atgctgggattctgtctgtcttgggcttgtagtggtgttgtggacactgtcacaactg-t 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 167 atgctgggattctgtctgtcttgggcttgtagtggtgttgtggacactgtcacaactgct 108
Query: 360 gtgagttcttatgtacactctggaaatcagtctggtggttcctcagaa 407
||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 107 gtgagttcttatgtacattctggaaatcagtctggcggttcctcagaa 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_h23.g1 MSMg01no358_h23.g1 CHROMAT_FILE:
MSMg01no358_h23.g1 PHD_FILE: MSMg01no358_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:47 2005
(460 letters)
>mm_chr3_145113210_145114069
Length = 860
Score = 820 bits (424), Expect = 0.0
Identities = 451/460 (98%)
Strand = Plus / Plus
Query: 1 caaagtgtttttcaaagcagtgggagagacagagcctgtttgtgagtgttgtgcccgagt 60
|||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 201 caaagtgtttttaaaagcagtgggagatacagagcctgtttgtgagtgtcatgcccgagt 260
Query: 61 gtctggcttcttgcattgaatatcacttattggagcaggaagacaattgaaaccccggct 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctggcttcttgcactgaatatcacttattggagcaggaagacaattgaaaccccggct 320
Query: 121 ggggaactgaagattacacactcgatgaggaatatgagatgcctttgagaaacattacgt 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggggaactgaagattacacactcaatgaggaatatgagatgcctttgagaaacattacgt 380
Query: 181 tgtctgctggactcagatcaaaggaattcgctaaagtgataaatatgagacatagggctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 tgtctgctggactcagatcaaaggaattcgctaaagtgataaatatgagacgtagggctg 440
Query: 241 gagatggctcagaagttaagagcacttgctgctcttgaagaagagttacgtttgcttccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagatggctcagaagttaagagcacttgctgctcttgaagaagagttacgtttgcttccc 500
Query: 301 agaaatcagaaaccatgtggcagtccacaaccacctgtaaccccagctgcagggcatctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaaatcagaaaccatgtggcagtccacaaccacctgtaaccccagctgcagggcatctc 560
Query: 361 atgccctcttctggcttcaataggcaccagctatacatttggttcacatatatagatgtg 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgccctcttctggcttcaagaggcaccagctatacatttggttcacatatatagatgtg 620
Query: 421 agcaaacactcagaatcacatgaacatcattacttggaga 460
|||||||||||| |||||||||||||||||||||||||||
Sbjct: 621 agcaaacactcacaatcacatgaacatcattacttggaga 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
