Query= MSMg01no359_g15.b1 MSMg01no359_g15.b1 CHROMAT_FILE:
MSMg01no359_g15.b1 PHD_FILE: MSMg01no359_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:54 2005
(480 letters)
>mm_chr3_83032852_83033733
Length = 882
Score = 801 bits (414), Expect = 0.0
Identities = 442/454 (97%), Gaps = 7/454 (1%)
Strand = Plus / Minus
Query: 31 agaaaaaggattttcttaaagatttatttattttatgtatatgagtacattgtagctttc 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 agaaaaaggattttcttaaagatttatttattttatgtatatgagtacattgtagctttc 823
Query: 91 ttcagacacaccaaaagaggacatcagatcccattacagatggttgtgagccactatgtg 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 ttcagacacaccaaaagaggacatcagatcccattacagatggttgtgagccactatgtg 763
Query: 151 gttgctgggaattgaactcaggacctctggaagagcagtcagtgttcttaactgctgagc 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gttgctgggaattgaactcaggacctctggaagagcagtcagtgttcttaactgctgagc 703
Query: 211 catctctccagccccccc-----cccagaaaaagaatttttaaaaaagcactgaacacat 265
|||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||
Sbjct: 702 catctctccagcccccccccccacccagtaaaagaatttttacaaaagcactgaacacat 643
Query: 266 taatccaaggagtggtcagg-ttatttttatatgcctacatacaagtcaaaggacaggcc 324
| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ttatccaaggagtggtcaggtttatttttatatgcctacatacaagtcaaaggacaggcc 583
Query: 325 agaggggcagcccagtgaggct-cctcccctggcatctcagcaccttcctgataccagat 383
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 582 agaggggcagcccagtgaggctccctcccctggcgtctcagcaccttcctgataccagat 523
Query: 384 gggttggacagaatagcaggaatccaaagagaagggtgacccttcatgtccccagcaaag 443
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gggttggacagaacagcaggaatccaaagagaagggtgacccttcatgtccccagcaaag 463
Query: 444 gacaaacaccagctactgctctctctgcattcac 477
||||||||||||||||||||||||||||||||||
Sbjct: 462 gacaaacaccagctactgctctctctgcattcac 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 882
Length adjustment: 10
Effective length of query: 470
Effective length of database: 872
Effective search space: 409840
Effective search space used: 409840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_g15.g1 MSMg01no359_g15.g1 CHROMAT_FILE:
MSMg01no359_g15.g1 PHD_FILE: MSMg01no359_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:54 2005
(431 letters)
>mm_chr3_82836653_82837483
Length = 831
Score = 833 bits (431), Expect = 0.0
Identities = 431/431 (100%)
Strand = Plus / Plus
Query: 1 tggctaggcaatgactacctccacttactcactctgaggggctcagttctcagggttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggctaggcaatgactacctccacttactcactctgaggggctcagttctcagggttgaa 260
Query: 61 ttagaggactgggctggaaaagaggcttatgcggagtaccacttccgggtaggctctgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagaggactgggctggaaaagaggcttatgcggagtaccacttccgggtaggctctgag 320
Query: 121 gcagagggctacgcgctgcaggtctcctcctaccggggcactgctggagatgctctggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagagggctacgcgctgcaggtctcctcctaccggggcactgctggagatgctctggtg 380
Query: 181 cagggctctgtggaggaggggacagaatacacctcacacagcaacatgcagttcagtacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagggctctgtggaggaggggacagaatacacctcacacagcaacatgcagttcagtacc 440
Query: 241 tttgacagagatgccgaccaatgggaagagaactgtgcagaggtctatgggggaggctgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgacagagatgccgaccaatgggaagagaactgtgcagaggtctatgggggaggctgg 500
Query: 301 tggtacaacagctgtcaggccgccaatctcaatggcatttactaccccgggggcacctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggtacaacagctgtcaggccgccaatctcaatggcatttactaccccgggggcacctac 560
Query: 361 gatcccaggaacaacagcccctatgagatagagaacggggtggtctgggttcccttcaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatcccaggaacaacagcccctatgagatagagaacggggtggtctgggttcccttcaga 620
Query: 421 ggagcagatta 431
|||||||||||
Sbjct: 621 ggagcagatta 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
