XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTAGGTTAGCCT
GAGTTACAGATGACCACACCTCAAAAACTTTAAAAAACAAACAAACAAAA
AAAGGCTTGGTCTGTATTTCTCATTCCTTTTAACATTCATTTGCTACCAA
CTTCGGTATCACCTATCTCACAGGGAAACATGCCCCTCCATGGTAACCTC
AAAACATGCTATGTGGCCATGGTCACTAATACTTGCCTCAGAATACAGAT
TTATTATGCCCTTTGGAGCACAAGCCTCGATTTACATGGAATCTTGAGTG
GCATGCACTTAACATAAATAAAAGAAATGCAACTTCCACATTAGAATTCC
AAATATAAAATTAAAATGATGTTGAATAATATTTATTAAATGAAAGTGTT
ATCTGTGGGTTCTTAAAATGCATGCAAAAATGTCTTTATCCATACTTGTC
AGTACTTTTTAAATTAATTATGAAAAATAAGGAAATTAATGCATCATTTC
ATTTTGCTTTACTGAATTGAAAATTTTTGGCAGNTACATTTTTAAAAATA
AAAAATATGCTCACCATGTGCCACTCTAATTAAGTTAATGTATAAAATAT
GTTCCTTTAGCCTATCCAAAACAAAACTATGAAATTGGCCCTGTGGAAAA
CTGAAAAAAAAATTGTTGGGGCAAAGTGTTTCGGCAACTTTCAAAACCTT
TCCCCAATTTTAAAAAAAAAAAAATTGATGGCCCCCTTTAAAGAGGCTAA
AAACCCCCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTGTTCG
ATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGC
CCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGG
TCTTTTTGTCTTGTTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTT
TCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACATGCAATTGCT
GTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCC
CACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCT
TGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATTGATT
CGCATTCTTCTACATGTGGGATTGCAGGCTTGTACAACCATTCTGGAAAT
CAGTCTGGCGGTTCCTCCGATAATTGTTCCTAGTACTACCCCAGGATCCG
TACTACCTCCCCTGGGATTTATTCTTAAAATGCCCCTTTGTCTCAAAGAT
ACCGGCCCTTTTACGGTTTTTTTGCCTTATTTTATTAATCACACGTTGGA
ATATTTACTTGCCTCCCCCTTAAGATTGGATTCTTAATGTTGGCCTCCCC
CTCCTGTGAATTTTTCCCGCCCCGCAATATATCCCCTTCATCCC

Query= MSMg01no359_i08.b1 MSMg01no359_i08.b1 CHROMAT_FILE:
MSMg01no359_i08.b1 PHD_FILE: MSMg01no359_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:02 2005
         (443 letters)



>mm_chr3_155860038_155860880
          Length = 843

 Score =  833 bits (431), Expect = 0.0
 Identities = 437/439 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctaggttagcctgagttacagatgaccacacctcaaaaactttaaaaaacaaaca 64
           ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gaattctaggccagcctgagttacagatgaccacacctcaaaaactttaaaaaacaaaca 584

                                                                       
Query: 65  aacaaaaaaaggcttggtctgtatttctcattccttttaacattcatttgctaccaactt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aacaaaaaaaggcttggtctgtatttctcattccttttaacattcatttgctaccaactt 524

                                                                       
Query: 125 cggtatcacctatctcacagggaaacatgcccctccatggtaacctcaaaacatgctatg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 cggtatcacctatctcacagggaaacatgcccctccatggtaacctcaaaacatgctatg 464

                                                                       
Query: 185 tggccatggtcactaatacttgcctcagaatacagatttattatgccctttggagcacaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tggccatggtcactaatacttgcctcagaatacagatttattatgccctttggagcacaa 404

                                                                       
Query: 245 gcctcgatttacatggaatcttgagtggcatgcacttaacataaataaaagaaatgcaac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gcctcgatttacatggaatcttgagtggcatgcacttaacataaataaaagaaatgcaac 344

                                                                       
Query: 305 ttccacattagaattccaaatataaaattaaaatgatgttgaataatatttattaaatga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ttccacattagaattccaaatataaaattaaaatgatgttgaataatatttattaaatga 284

                                                                       
Query: 365 aagtgttatctgtgggttcttaaaatgcatgcaaaaatgtctttatccatacttgtcagt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aagtgttatctgtgggttcttaaaatgcatgcaaaaatgtctttatccatacttgtcagt 224

                              
Query: 425 actttttaaattaattatg 443
           |||||||||||||||||||
Sbjct: 223 actttttaaattaattatg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space:   360689
Effective search space used:   360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)