Query= MSMg01no359_o07.b1 MSMg01no359_o07.b1 CHROMAT_FILE:
MSMg01no359_o07.b1 PHD_FILE: MSMg01no359_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:29 2005
(368 letters)
>mm_chr3_118535960_118536728
Length = 769
Score = 675 bits (349), Expect = 0.0
Identities = 364/369 (98%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 1 caatttaatcaaacttggtttctaaaacgccaaataaatgtggtcataagagccatctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 caatttaatcaaacttggtttctaaaacgccaaataaatgtggtcataagagccatctaa 510
Query: 61 aattaggtccataataacaaatacataaggtaagctgattctgtgaatgtatgcaaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aattaggtccataataacaaatacataaggtaagctgattctgtgaatgtatgcaaaaca 450
Query: 121 tcaaatttctagaacacatatgcagattgtgtgtgtatgtctgtgtctatgtttacacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tcaaatttctagaacacatatgcagattgtgtgtgtatgtctgtgtctatgtttacacac 390
Query: 181 acacatatgtgtgtatttaatttggtttcagctattaaaatcatttcaaagcacaagcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 acacatatgtgtgtatttaatttggtttcagctattaaaatcatttcaaagcacaagcaa 330
Query: 241 aggctatttatctacttgctctaagttttaattacacaaaaa-aaagtggtaccaagtta 299
|||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||
Sbjct: 329 aggctatttatctacttgctctaagttttaattacacaaaaagaaagtgggacaaagtta 270
Query: 300 gaatcaactgtaaaaatatctcatttttttcttctgaaaaggaatattctgtatccgggc 359
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 269 gaatcaactgtaaaaatatctcatttttttcttctgtaaaggaatattctgtagccgggc 210
Query: 360 agtggtggc 368
|||||||||
Sbjct: 209 agtggtggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 769
Length adjustment: 9
Effective length of query: 359
Effective length of database: 760
Effective search space: 272840
Effective search space used: 272840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_o07.g1 MSMg01no359_o07.g1 CHROMAT_FILE:
MSMg01no359_o07.g1 PHD_FILE: MSMg01no359_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:29 2005
(386 letters)
>mm_chr3_118359089_118359874
Length = 786
Score = 679 bits (351), Expect = 0.0
Identities = 375/383 (97%), Gaps = 2/383 (0%)
Strand = Plus / Plus
Query: 1 ttctaaagataca-tcatctgaacatacaatgtttcatagaatataacctttcttaccag 59
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 ttctaaagatacaatcatctgaacatacaatgtttcatagaatataacctttcttagcag 260
Query: 60 gcaaattaaattacgaaagaaaaagaagataaagttgtagggagccaaagtgtaatttta 119
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaattaaattaccaaagaaaaagaagataaagttgtagggagccaaagtgtaatttta 320
Query: 120 aaattaggctgctcttagctccgcaaatgcacaaggaggcctggcctatgtagagggcat 179
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 321 aaattaggctgctcttagctccccaaatgca-aaggaggcctggcctatgtagagggcat 379
Query: 180 atactttatttctgtgtcacatgtttgatagcattttgacaggtgacatatatgttgagt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atactttatttctgtgtcacatgtttgatagcattttgacaggtgacatatatgttgagt 439
Query: 240 taataaaagggcgagtcagccaattactcctaggtgtgatacctaacctgcagtgagtta 299
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taataaaagggcaagtcagccaattactcctaggtgtgatacctaacctgcagtgagtta 499
Query: 300 tagcaagtgataatgcacaggtatcagttgcgcgtggcttgttgcttgaggggtaggact 359
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 500 tagcaagtgataatgcacaggtatcagttgcgcgtggcttgctgcttgaggggtaggact 559
Query: 360 ggacgtccattttctcttctcag 382
|||||||||||||||||||||||
Sbjct: 560 ggacgtccattttctcttctcag 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 786
Length adjustment: 9
Effective length of query: 377
Effective length of database: 777
Effective search space: 292929
Effective search space used: 292929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
