CTXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGTTTAGCTC
TGAGCCCCATTTTCTAATGGGGTTATATGATTTTCTGGAGTCTACCTTCT
TGAGTTCTTTATATATATATATATATATATATTGGATATTAGACCCCTAT
CCGATTTGGGATAGGTAAAGATCCTTTCCCAATGATTTGGTGGTCTTTTT
GTCTTATTGAAGGTGTCTTTTGCCTTGCAGAAGCTTTGCAGTTTCATGAG
GTCCCATTTGTCAATCCTCTAACTTATAGCACAAGCCATTGCTGTTCTAT
TCAGGAATTTTTCCCCTGTGCCCATATCTTTGAGTCTTTTCCCCACTTTC
TCATCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCA
CTTAGATTTGACCTTAGTACAAGGAGATAGGAATGGATCAATTCCCATTC
TTCTACATGATTAACACCAGTTATGCCTACTTCATTTGTTGAAACGCCGT
CTTTCTTCTCCTGTATGGCTCTATTCTCCTTTTTCTAACTCTCGTGTCTC
TTTCTGCTGTGTCTTCTCTTTCGGGTTCTACAATTTCTTCCCTCGTTTTT
TGATTCCTGTCCTATCCTATTTCTCACTAAATCCCCCTTTCCCCCTATTT
TCTTCTTATCTGTTCCTTCTTTTGTCTTGTTTTCCCCCCAAAACACTTTA
CTTTCTTTCCCTCTTTAATCCCTCTTATTTTTCTACCTTCCTACCTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXTTCACCTGCTCAGGCATGTGTCATTATCAAACATCCCTGGCA
AGGCTTCTCTCTCTCTGTGAAATATTTCTAGTAAAATTCTGCCTGAACAT
TGTCTTTCACTGGCATCTTCAAAGTGCCAGATTATCAATGCTTTAAGGAG
AGAAGTTCAAGACAGTTTTCAAATTGACATTGAAGGGAATTTCACAATAG
TGAGTTGTATTTTCCAGAACTATATAGATCATCAGGAATATTTCTTAAGG
CCTAAATTCCCTGAGAATCCTCTTTAAAGTACTCATGTCTACTCATGTCT
CATCGCCTATATCTTTCCAGAACCCTTTTCTCATAAAAAACATTCATTTA
TTAGTGATAAATAGTAGAGGAGCAAAAGCCCAGGGAAAGGAAACTTCTAG
GCACTGAAGGGTGGAAGGCTGAAGTGTTCACTGCTAGGCTTGCAGATAAT
TACGTATGCTCTATTACCATAGTGGAATAATTCACTTTTATTTCTTTAGA
CAAGTACTTATTTTGCATTTTGCTCTTTAAAAGGAGTTTTATTAACCCTT
TGTGCTTATTTCCTAAGAAATATCAACGCCTTTTTCCCCTTTCATTATTA
TAAACTTCCCCTTCATTTTCCTCCCCTTGATTCTATTGTATTCGTTCTAC
ATAACAATACGCTATATCTTTGCATATCTTCCCCCTTCTTTCTTTTGACC
TTCTTATATGTN

Query= MSMg01no359_o10.g1 MSMg01no359_o10.g1 CHROMAT_FILE:
MSMg01no359_o10.g1 PHD_FILE: MSMg01no359_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:30 2005
         (417 letters)



>mm_chr3_42846370_42847184
          Length = 815

 Score =  775 bits (401), Expect = 0.0
 Identities = 413/417 (99%), Gaps = 2/417 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcacctgctcaggcatgtgtcattatcaaacatccctggcaaggcttctctctctctgt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 615 ttcacctgctcaggcatgtgtcattatcaaacatccctggcaaggcttctct-t-tctgt 558

                                                                       
Query: 61  gaaatatttctagtaaaattctgcctgaacattgtctttcactggcatcttcaaagtgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gaaatatttctagtaaaattctgcctgaacattgtctttcactggcatcttcaaagtgcc 498

                                                                       
Query: 121 agattatcaatgctttaaggagagaagttcaagacagttttcaaattgacattgaaggga 180
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 agattatcaatgctttaaagagagaagttcaagacagttttcaaattgacattgaaggga 438

                                                                       
Query: 181 atttcacaatagtgagttgtattttccagaactatatagatcatcaggaatatttcttaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atttcacaatagtgagttgtattttccagaactatatagatcatcaggaatatttcttaa 378

                                                                       
Query: 241 ggcctaaattccctgagaatcctctttaaagtactcatgtctactcatgtctcatcgcct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ggcctaaattccctgagaatcctctttaaagtactcatgtctactcatgtctcatcgcct 318

                                                                       
Query: 301 atatctttccagaacccttttctcataaaaaacattcatttattagtgataaatagtaga 360
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atatctttccaggacccttttctcataaaaaacattcatttattagtgataaatagtaga 258

                                                                    
Query: 361 ggagcaaaagcccagggaaaggaaacttctaggcactgaagggtggaaggctgaagt 417
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ggagcaaaagcccagggaaaggaaacttctaggcactgaagggtggaaggctgaagt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 815
Length adjustment: 9
Effective length of query: 408
Effective length of database: 806
Effective search space:   328848
Effective search space used:   328848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)