Query= MSMg01no361_a01.b1 MSMg01no361_a01.b1 CHROMAT_FILE:
MSMg01no361_a01.b1 PHD_FILE: MSMg01no361_a01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:54 2005
(645 letters)
>mm_chr3_128616871_128617915
Length = 1045
Score = 1216 bits (629), Expect = 0.0
Identities = 638/641 (99%)
Strand = Plus / Plus
Query: 5 gaattcacatttgaccctaaactgtcatatatcccttatgtcaattgtgtttctaccctg 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacatttgaacctaaactgtcatatatcccttatgtcaattgtgtttctaccctg 264
Query: 65 aattactaaacataaatttgttttcagagccacgatataaacatagccatgagccacagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aattactaaacataaatttgttttcagagccacgatataaacatagccatgagccacagg 324
Query: 125 tcatgctgtgggagcgatattcacctgaaatgccctctgctttggacattgtatcgggga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcatgctgtgggagcgatattcacctgaaatgccctctgctttggacattgtatcgggga 384
Query: 185 ccaaccccacacaccacgtatcgcttccgctgcctcccccacaggctgttatctagtgtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccaaccccacacaccacgtatcgcttccgctgcctcccccacaggctgttatctagtgtt 444
Query: 245 tatctgcaaaatctggacaggaactgtactgaagagctcagttcaccttcctttgttgaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatctgcaaaatctggacaggaactgtactgaagagctcagttcaccttcctttgttgaa 504
Query: 305 gaaaggacactgcatttgtcatcagtgtggtttgtcaacaggcttagagacaatatggag 364
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaaagaacactgcatttgtcatcagtgtggtttgtcaacaggcttagagacaatatggag 564
Query: 365 ggctccatatttggttcagtgattttggtctaaacagtgatggagatctttgtatgcttc 424
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gactccatatttggttcagtgattttggtctaaacagtgatggagatctttgtatgcttc 624
Query: 425 aggaaggacgtgtccctaaatgaattataatatggtcccatcattatcactgctcctagc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aggaaggacgtgtccctaaatgaattataatatggtcccatcattatcactgctcctagc 684
Query: 485 cccttcctggggacctcagaggttttaataaactataaatatgttcatataccattctta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cccttcctggggacctcagaggttttaataaactataaatatgttcatataccattctta 744
Query: 545 tagcaaagaaaaactccgagttcaaagttttatgatgatgaagaatacacaaaataactt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tagcaaagaaaaactccgagttcaaagttttatgatgatgaagaatacacaaaataactt 804
Query: 605 gaataattctccagaaagaaaaatattacacacacgcacat 645
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gaataattctccagaaagaaaaatattacacacacgcacat 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_a01.g1 MSMg01no361_a01.g1 CHROMAT_FILE:
MSMg01no361_a01.g1 PHD_FILE: MSMg01no361_a01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:54 2005
(435 letters)
>mm_chr3_128805289_128806123
Length = 835
Score = 348 bits (180), Expect = e-100
Identities = 227/264 (85%), Gaps = 33/264 (12%)
Strand = Plus / Minus
Query: 1 tttctagggtactgtggttgccttttcctggttctggtgcctattttggtaatggtagga 60
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 394 tttctagggtagtgtggttgccttttcctggttctggtgccttttttggtaatggtagga 335
Query: 61 aagggaatagtcagtagtttgaattcaaggctgcagcttttcctatatgttattaatttt 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aagggaatagtcagtagtttgcattcaaggctgcagcttttcctatatgttattaatttt 275
Query: 121 aattgtaacttgatactgagttttgtttttctgtagctctaagcatcttttctcagaatg 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aattgtaacttgatactgatttttgtttttctgtagctctaagcatcttttctcagaatg 215
Query: 181 tgttgtactgctgctaacagaacagaatataaatcattctctctagccatgattcacaaa 240
|||||||||||| |||||||||||||||
Sbjct: 214 tgttgtactgct---------------------------------gccatgattcacaaa 188
Query: 241 attattgaagagagtatgtatata 264
||||||||||||||||||||||||
Sbjct: 187 attattgaagagagtatgtatata 164
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
