NCTCTATATTTGGCGGCGCTATACGACTCACTATTTCGAGAGGATCCGCG
GAATTCCTTCTTTATGTCCTCTACCATCATCATGAGATATGCTTTTAAAT
CCAGGTCTACCTTTTCAGGTGTGTTAGGGTGTCTTGGACTGGGCGAAGTG
GGCGTTCTGGGTTCTGATGCTGGTGAGTGGTCCTGGTTTCTGTTAGTAGG
ATTCTTACGTTTACCTTTCGCCATCTGGCAATCTCAGGAGTTAGTTGTTA
TAGTTGTCTTTGTTAAGAGATTGTTCCTCTGTTGATTTTGTTACCCTCAA
TCAGCAGGCGTGGGAGACAAGCTCTCTCCTCTGAGTTTCAGTGGTCAGAG
CAGTCTCTGCAGGCAAGCTCTCCTCTTTCGGGGAAGGTGTACAGTTATCT
GGTGTTTGGACCTCCTCCTGGCTGAAGGTGAAGGCCCAAAACAGGATTTT
CCCAGAAGCTGTGTTGCTTTGGCCAGGAAGGTGGCCGGTTGTCTGGAGTC
GAAGATGGCGCCGCCTCAGAAGCTCTGTGGCTCTCGACAGGAAGGTGGCT
GGCCGTCTGGAGCCGAAGATGGCGCCACCTCAGAAGCTCTGTGGCTCTAG
CCAGGAAGGTGGCTGGTTGTCTGGAGCCGAAGATGGTGCCGCCCCAGAAT
TTCTGTGACTCTCGTCTGTACCATAATCGGTTGGCCTCTGTATTCCACTT
GGTCCCCCTTGTCAGTCTGTCCTCCTCTGGAGTCCCGTATTCTTCAAGGC
CCTTTCCGGGGGC

NCCGAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAGAAAAAAAAAGGAGATTA
TTTTTTCTCACATTTAGAAGGTAGTCTGTTCTACAGCTTTTAGGCCTGAA
GTGAGGCAGCACATTTTGAGGTACAGCAGGGGGATAATTTTTACCTTGAT
AGTTAAGAAACAGAGAAATAGGAAAACAAGGTTCCACTACTACCATGAAG
CAGAATAAATCTTGCCATCAGGGCCAGTCTCAAAGTTACTGTGCCTCTTA
ATCAAACCAAGGTCTGGAGACACATATTTTAACACATGGGACTTTGTCAG
ACATTAAAAATTTAGATTATATCATAAGTACATGAGAGCCATACAATGAA
AAGCAACATAATAAATCCCATGCATAAGATGTTACCCATTAACTGAGAAT
GACCCAGAGATAACATCACATATTTAAAAATTATTTATGGATTTATTAGA
TATAAATAAACAAATAAATCATACCAATGACAGCACTTGAAATTGACTAA
TTGTTAAATCTCTCATAAACTGAAGGAAGTAACGAGATTACATGTCTTAA
TTCTTGGAAGCAATATTTTTAAATGAACTGTAGTCATCAAACCCTTAATA
TAGTAGAATAATAAAAAAAAGAGAAAGAAAAAGAAGAGAAATATTTTTCT
AGATTGTGTATACAACACATCTTTTAAGCCTCATGTCATGCCCCAAGCAA
TGCATCACATATCTGG

Query= MSMg01no361_j20.g1 MSMg01no361_j20.g1 CHROMAT_FILE:
MSMg01no361_j20.g1 PHD_FILE: MSMg01no361_j20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:42 2005
         (613 letters)



>mm_chr3_77997353_77998365
          Length = 1013

 Score = 1120 bits (579), Expect = 0.0
 Identities = 588/591 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaagaaaaaaaaaggagattattttttctcacatttagaaggtagtctgttctacagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 aaaagaaaaaaaaaggagattattttttctcacatttagaaggtagtctgttctacagct 532

                                                                       
Query: 61  tttaggcctgaagtgaggcagcacattttgaggtacagcagggggataatttttaccttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tttaggcctgaagtgaggcagcacattttgaggtacagcagggggataatttttaccttg 472

                                                                       
Query: 121 atagttaagaaacagagaaataggaaaacaaggttccactactaccatgaagcagaataa 180
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 471 atagttaagaaacagagaaataggaaaacaaggtcccactactaccatgaagcagaataa 412

                                                                       
Query: 181 atcttgccatcagggccagtctcaaagttactgtgcctcttaatcaaaccaaggtctgga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 atcttgccatcagggccagtctcaaagttactgtgcctcttaatcaaaccaaggtctgga 352

                                                                       
Query: 241 gacacatattttaacacatgggactttgtcagacattaaaaatttagattatatcataag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gacacatattttaacacatgggactttgtcagacattaaaaatttagattatatcataag 292

                                                                       
Query: 301 tacatgagagccatacaatgaaaagcaacataataaatcccatgcataagatgttaccca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tacatgagagccatacaatgaaaagcaacataataaatcccatgcataagatgttaccca 232

                                                                       
Query: 361 ttaactgagaatgacccagagataacatcacatatttaaaaattatttatggatttatta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ttaactgagaatgacccagagataacatcacatatttaaaaattatttatggatttatta 172

                                                                       
Query: 421 gatataaataaacaaataaatcataccaatgacagcacttgaaattgactaattgttaaa 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 171 gatataaataaacaaataaatcataccaatgacagcacttgaaattgactaattgtcaaa 112

                                                                       
Query: 481 tctctcataaactgaaggaagtaacgagattacatgtcttaattcttggaagcaatattt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 tctctcataaactgaaggaagtaacgagattacatgtcttaattcttggaagcaatattt 52

                                                              
Query: 541 ttaaatgaactgtagtcatcaaacccttaatatagtagaataataaaaaaa 591
           |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 51  ttaaatgaactgtagtcatcaaacccttaatataatagaataataaaaaaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space:   604809
Effective search space used:   604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)