TACGCTACCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCAATTGGAGTCATAATATTAATTATATTCATTCACA
CTTATACTGGGGTTATTCTCATGCCAGAATCCATAGGTTGAAAAATAAAA
AGCCCTACTGTCAGTTGTGTGACACTTTCTCTTAAACTATTGAACAGGAG
TGCTTATAAAAAAAAAAAAACCCAAGTAACACAGGGTATTGACTGGCTCT
TGGTTTCTCATCAAAACATGAGAGTAGTACCTTATTCCTGAAGATACCAC
ACACATTGGTCACAGGACACAGGAATCTAGTTGGGATTACTAGAGAAAAT
TTTCCTCCCTATTAGTTAACTTTCAATGCATGGAAAGATGCTATGCAGGC
TTCTCAAAAGATAGCATAAACTACTCATGTGTGAACTCTGTGGATTGCAA
AAATATCCAGTAGGGCAAGATATGCCCATGGCTGCTATAGTGTCACTAAT
CTTATGGAAATAAACAGCCATTTTCTGAATGGATTTAAGACCTGCTCCAC
AGAATGTAACACATAATATAATCTGCCCAGGAATCTAAGGTTAGTGAGTA
GATTTCTTGTAGGCTTCAAGTATGGACCACTAAATGGACATATTATAAAA
TTTGCTTTCCTCCCTCACCCTACACCTCACCTTCTACAAAAACATGAATA
CCAGGAACATTTTAATAATTTTCTTAAGTAAAN

NTTTTCTTCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTTGTGAACACAGTT
CAGTGAAATAACTATGGATGCCATTCTCATTAACCAGAGAATCCCGAAAA
AGGAAAGCGGAAATAATCCCTAAAGTTACAGAAAACTAAAACGATGTTAT
TTAATACCTTTAGTATCAACTAGCTTTAAAAGGTGGAAAATAAGATTTCC
CAAGAAAGATACAATGCAATAAGGTATTCAAAAATAGATTCTAATTTCTC
ATTAGAATATAATTATATGTGTTGTATATGAACATACATACAGCATCACT
AAAATGTTCATCTATATTCATATAGCAACTTACAATGGAATAAGTGAATG
GACATGACAGATACAGATAATGTTGGTCACTGGAGAAGTTATAGAAGAGG
GCCACAACACAGACACACACACACACACACACACACACACACCATAGGCT
AATGAATGAACAAATAAAGGTGATTTTCAGGAAACCTTGTAAGGATAACA
TGGCATGGCAAGTAACAATTTGTTAAACATGCCCTACTTTGTTTGATTTT
ATACGTTATATTCCTTCTCCCCGAAGCGCCTGCTCTTTTGTACTTTTGTC
TTCCCCGCGTTTATCTTCTACCAATATCGCCCTTTAAGTTGCGTTTTATT
CCCGTTTCCCTTTTTTTATCTTTCCCCTTTAACCCACACTTCATCTTCTA
TTTTTCTGCGACTCTCTTCCCTCTCTTTTCCCCN

Query= MSMg01no361_k06.g1 MSMg01no361_k06.g1 CHROMAT_FILE:
MSMg01no361_k06.g1 PHD_FILE: MSMg01no361_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:44 2005
         (420 letters)



>mm_chr3_150978003_150978822
          Length = 820

 Score =  766 bits (396), Expect = 0.0
 Identities = 405/408 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atttgtgaacacagttcagtgaaataactatggatgccattctcattaaccagagaatcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 atttgtgaacacagttcagtgaaataactatggatgccattctcattaaccagagaatcc 513

                                                                       
Query: 61  cgaaaaaggaaagcggaaataatccctaaagttacagaaaactaaaacgatgttatttaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 cgaaaaaggaaagcggaaataatccctaaagttacagaaaactaaaacgatgttatttaa 453

                                                                       
Query: 121 tacctttagtatcaactagctttaaaaggtggaaaataagatttcccaagaaagatacaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tacctttagtatcaactagctttaaaaggtggaaaataagatttcccaagaaagatacaa 393

                                                                       
Query: 181 tgcaataaggtattcaaaaatagattctaatttctcattagaatataattatatgtgttg 240
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgcaataaggtattaaaaaatagattctaatttctcattagaatataattatatgtgttg 333

                                                                       
Query: 241 tatatgaacatacatacagcatcactaaaatgttcatctatattcatatagcaacttaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tatatgaacatacatacagcatcactaaaatgttcatctatattcatatagcaacttaca 273

                                                                       
Query: 301 atggaataagtgaatggacatgacagatacagataatgttggtcactggagaagttatag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atggaataagtgaatggacatgacagatacagataatgttggtcactggagaagttatag 213

                                                           
Query: 361 aagagggccacaacacagacacacacacacacacacacacacacacac 408
            |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 212 gagagggccacaacacacacacacacacacacacacacacacacacac 165


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space:   333321
Effective search space used:   333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)