Query= MSMg01no362_a12.b1 MSMg01no362_a12.b1 CHROMAT_FILE:
MSMg01no362_a12.b1 PHD_FILE: MSMg01no362_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:15 2005
(513 letters)
>mm_chr3_49672226_49673139
Length = 914
Score = 971 bits (502), Expect = 0.0
Identities = 508/510 (99%), Gaps = 1/510 (0%)
Strand = Plus / Plus
Query: 5 gaattcttactttaacaa-acaaggtatacttagttgtgttcttttatctagaacctcat 63
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttactttaagaatacaaggtatacttagttgtgttcttttatctagaacctcat 264
Query: 64 tcatacatatgaccttaccagatgctaaataaataaataaatcccaagggagttcaggaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcatacatatgaccttaccagatgctaaataaataaataaatcccaagggagttcaggaa 324
Query: 124 aatgacatggtttgttgcaaagtaactattgactggatgaggtctccacattgtagactc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aatgacatggtttgttgcaaagtaactattgactggatgaggtctccacattgtagactc 384
Query: 184 atcttgcttgtctattgacacacgaggctggcttctgtggaatatgtctttaggaatgag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atcttgcttgtctattgacacacgaggctggcttctgtggaatatgtctttaggaatgag 444
Query: 244 tttggaacagagtcagatctcactcttcttttattgccaaagttctacaaccatgatcca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttggaacagagtcagatctcactcttcttttattgccaaagttctacaaccatgatcca 504
Query: 304 gtccatgaggagtttggtattaaccagcacattaaagataatcatactcattataaaaac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtccatgaggagtttggtattaaccagcacattaaagataatcatactcattataaaaac 564
Query: 364 tgaatctacttcataactatacaatatagacattgatattacttttctgtgtcaatgggt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgaatctacttcataactatacaatatagacattgatattacttttctgtgtcaatgggt 624
Query: 424 tggatcaactcattaattcagaagcaggacatgtcacagaagacaaatcaaaagtggttg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tggatcaactcattaattcagaagcaggacatgtcacagaagacaaatcaaaagtggttg 684
Query: 484 gtcagacactgaataggtgacctatgcata 513
||||||||||||||||||||||||||||||
Sbjct: 685 gtcagacactgaataggtgacctatgcata 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 914
Length adjustment: 10
Effective length of query: 503
Effective length of database: 904
Effective search space: 454712
Effective search space used: 454712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_a12.g1 MSMg01no362_a12.g1 CHROMAT_FILE:
MSMg01no362_a12.g1 PHD_FILE: MSMg01no362_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:15 2005
(193 letters)
>mm_chr3_49733730_49734322
Length = 593
Score = 373 bits (193), Expect = e-108
Identities = 193/193 (100%)
Strand = Plus / Minus
Query: 1 agtattcagggacacaaatgttttcttggataatccctgtgctatataaatctgaagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 agtattcagggacacaaatgttttcttggataatccctgtgctatataaatctgaagcag 299
Query: 61 ggaaatagtaatattatcactgagagattctgggaactttgaaatgtttttttaaaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ggaaatagtaatattatcactgagagattctgggaactttgaaatgtttttttaaaaatc 239
Query: 121 tgtaatttagaatggggcacacatttgtggaggaagaagaagagaatggaagggaagggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tgtaatttagaatggggcacacatttgtggaggaagaagaagagaatggaagggaagggg 179
Query: 181 aggggaggggagg 193
|||||||||||||
Sbjct: 178 aggggaggggagg 166
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 593
Length adjustment: 8
Effective length of query: 185
Effective length of database: 585
Effective search space: 108225
Effective search space used: 108225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
